@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : jhp_0167: (2015-12-13 )
MIKAIDISHAFEKPLYNGVNLRIKPKESLAILGVSGSGKSTLLSHLATMLKPDSGTVSLLEHQDIYALNSKKLLELRRLKVGIVFQSHYLFKGFSALENLQVASILAKQEINHSLLEQLGIAHTLKQGVGELSGGQQQRLSIARVLSKKPQIIIADEPTGNLDTTSANQVISMLQNYITENEGALVLATHDEHLAFTCSQVYRLEKESLIKEK

Atome Classification :

(20 SA) .........10---.-----.-...--...20........30........40........50........60........70........80........90........100---...------.------.-----.-----.----110.....---..120..-..---...--------130--.........140.......150.......160.......170.......180.--......190....-...200.......210.
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MIKAIDISHAF---E-----K-PLY--NGVNLRIKPKESLAILGVSGSGKSTLLSHLATMLKPDSGTVSLLEHQDIYALNSKKLLELRRLKVGIVFQSHYLFKGFSALENLQV---ASI------L------A-----K-----Q----EINHSLLE---QLGIAHT-LK---QGV--------G----ELSGGQQQRLSIARVLSKKPQIIIADEPTGNLDTTSANQVISMLQNYITENEG--ALVLATHDEHLAF-TCSQVYRLEKESLIKEK
137 HHSearch 88.4637% -99 - C1 -2PCJ - LOLD_AQUAE A:[4-220] ILRAENIKKVI---RG----Y-EIL--KGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEG-KEVDYTNEKELSLLRNRKLGFVFQFHYLIPELTALENVIV---PML------K------MG----KPKKEAK----ERGEYLLS---ELGLGDK-LS---RKP--------Y----ELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRVMDIFLKIN-EGGT--SIVMVTHERELAE-LTHRTLEMKDGKVVGEI
22 PsiBlast_CBE 87.8735%-104 - C1 -1L2T Y796_METJA B:[1-209] MIKLKNVTKTYKMGE-----E-IIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEV-YIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVEL---PLIFKYRGAM------S-----G-----E----ERRKRALE---CLKMAEL-EE---RFA--------NHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGK--TVVVVTHDINVAR-FGERIIYLKDGEVEREE
3 PsiBlast_PDB 87.6135%-100 - C1 -1L2T Y796_METJA A:[1-209] MIKLKNVTKTYKMGE-----E-IIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEV-YIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVEL---PLIFKYRGAM------S-----G-----E----ERRKRALE---CLKMAEL-EE---RFA--------NHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGK--TVVVVTHDINVAR-FGERIIYLKDGEVEREE
23 PsiBlast_CBE 85.7434%-104 - C1 -3TIF Y796_METJA B:[1-209] MVKLKNVTKTYKMGE-----E-IIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEV-YIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVEL---PLIFKYRGAM------S-----G-----E----ERRKRALE---CLKMAEL-EE---RFA--------NHKPNQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGK--TVVVVTHDINVAR-FGERIIYLKDGEVEREE
4 PsiBlast_PDB 84.3834%-101 - C1 -3TIF Y796_METJA A:[1-209] MVKLKNVTKTYKMGE-----E-IIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEV-YIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVEL---PLIFKYRGAM------S-----G-----E----ERRKRALE---CLKMAEL-EE---RFA--------NHKPNQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGK--TVVVVTHDINVAR-FGERIIYLKDGEVEREE
139 HHSearch 81.8932%-103 - C1 -3TIF Y796_METJA A:[1-226] MVKLKNVTKTY---KMGEEII-YAL--KNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDN-IKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVEL---PLI------F------KYRGAMS-----GEERRKRALECLK---MAELEERFAN---HKP--------N----QLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGK--TVVVVTHDINVAR-FGERIIYLKDGEVEREE
130 HHSearch 81.6128%-111 - C1 -3RLF MALK_ECOLI A:[3-214] SVQLQNVTKAW---GE----V-VVS--KDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGE-KRMNDTP------PAERGVGMVFQSYALYPHLSVAENMSF---GLK------L------AG----AKK---EVIN-QRVNQVAE---VLQLAHL-LD---RKP--------K----ALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGR--TMIYVTHDQVEAMTLADKIVVLDAGRVAQVG
129 HHSearch 81.3029%-102 - C1 -2YYZ ? A:[3-214] SIRVVNLKKYF---GK----V-KAV--DGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDD-VLVNDIPP------KYREVGMVFQNYALYPHMTVFENIAF---PLR------A------RRIS--K-----DEVE-KRVVEIAR---KLLIDNL-LD---RKP--------T----QLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQELGI--TSVYVTHDQAEAMTMASRIAVFNQGKLVQYG
124 HHSearch 80.8534%-102 - C1 -2IT1 - ? A:[4-214] -IKLENIVKKF---GN----F-TAL--NNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDE-KDVTELP------PKDRNVGLVFQNWALYPHMTVYKNIAF---PLE------L------RK----APR---EEID-KKVREVAK---MLHIDKL-LN---RYP--------W----QLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGI--TTVYVTHDQAEALAMADRIAVIREGEILQVG
32 PsiBlast_CBE 80.0136%-103 - C1 -2IT1 ? B:[20-202] ---------------------------NNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKI-YFDEKDVTELPPKDR------NVGLVFQNWALYPHMTVYKNIAF---PLE------L------R-----KAPR--E----EIDKKVREVAKMLHIDKL-LN---RYP--------W----QLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGI--TTVYVTHDQAEAL-AMADRIAVIREGEILQV
5 PsiBlast_PDB 78.6837% -96 - C1 -1F3O Y796_METJA A:[24-209] -----------------------------VNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEV-YIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVEL---PLI------FKYRGAMS-----G-----E----ERRKRALE---CLKMAEL-EE---RFA--------NHKPNQLSGGQQQRVAIARALANNPPIILADEPTGALDSKTGEKIMQLLKKLNEEDGK--TVVVVTHDINVAR-FGERIIYLKDGEVEREE
2 PsiBlast_PDB 78.2041% -97 - C1 -2PCL LOLD_AQUAE A:[22-203] ----------------------------GISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKV-FLEGKEVDYTNEKELSLLRNRKLGFVFQFHYLIPELTALENVIV---PMLK-----M------G-----KPKKEAK----ERGEYLLS---ELGLGDK-LS---RKP--------Y----ELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRVMDI---FLKINEGGTSIVMVTHERELAE-LTHRTLEMKDGKVVGEI
26 PsiBlast_CBE 78.0833% -83 - C1 -5C78 ? B:[349-564] -LKICNLSFGY---EGK---K-YLF--KNLNLNIKKGEKIAFIGESGCGKSTLVDLIIGLLKPKEGQI-LIDKQELNASNAKNY----RQKIGYIPQNIYLFND-SIAKNITF---GDA------V------D-----E-----E----KLN-KVIK---QANLEHF-IKNLPQGVQTKVGDGGS----NLSGGQKQRIAIARALYLEPEILVLDQATSALDTQSEAKI--MDEIYKISKDK--TMIIIAHRLSTIT-QCDKVYRLEHGKLKEEK
7 PsiBlast_PDB 78.0633% -87 - C1 -5C76 - ? A:[349-564] -LKICNLSFGY---EGK---K-YLF--KNLNLNIKKGEKIAFIGESGCGKSTLVDLIIGLLKPKEGQI-LIDKQELNASNAKNY----RQKIGYIPQNIYLFND-SIAKNITF---GDA------V------D-----E-----E----KLN-KVIK---QANLEHF-IKNLPQGVQTKVGDGGS----NLSGGQKQRIAIARALYLEPEILVLDQATSALDTQSEAKI--MDEIYKISKDK--TMIIIAHRLSTIT-QCDKVYRLEHGKLKEEK
25 PsiBlast_CBE 77.2133% -85 - C1 -5C78 ? C:[349-564] -LKICNLSFGY---EGK---K-YLF--KNLNLNIKKGEKIAFIGESGCGKSTLVDLIIGLLKPKEGQI-LIDKQELNASNAKNY----RQKIGYIPQNIYLFND-SIAKNITF---GDA------V------D-----E-----E----KLN-KVIK---QANLEHF-IKNLPQGVQTKVGDGGS----NLSGGQKQRIAIARALYLEPEILVLDQATSALDTQSEAKI--MDEIYKISKDK--TMIIIAHRLSTIT-QCDKVYRLEHGKLKEEK
131 HHSearch 77.1028% -92 - C1 -1OXX ? K:[3-222] RIIVKNVSKVF---KKGK--V-VAL--DNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDD-RLVASNGKLI-VPPEDRKIGMVFQTWALYPNLTAFENIAF---PLT------N------MKMS--KEEI--R----KRVEEVAK---ILDIHHV-LN---HFP--------R----ELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGV--TLLVVSHDPADIFAIADRVGVLVKGKLVQVG
8 PsiBlast_PDB 76.9433% -81 - C1 -5C78 ? A:[349-564] -LKICNLSFGY---EGK---K-YLF--KNLNLNIKKGEKIAFIGESGCGKSTLVDLIIGLLKPKEGQI-LIDKQELNASNAKNY----RQKIGYIPQNIYLFND-SIAKNITF---GDA------V------D-----E-----E----KLN-KVIK---QANLEHF-IKNLPQGVQTKVGDGGS----NLSGGQKQRIAIARALYLEPEILVLDQATSALDTQSEAKI--MDEIYKISKDK--TMIIIAHRLSTIT-QCDKVYRLEHGKLKEEK
16 PsiBlast_PDB 76.9036% -98 - C1 -2IT1 - ? A:[20-202] ---------------------------NNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKI-YFDEKDVTELPPKDR------NVGLVFQNWALYPHMTVYKNIAF---PLE------L------R-----KAPR--E----EIDKKVREVAKMLHIDKL-LN---RYP--------W----QLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGI--TTVYVTHDQAEAL-AMADRIAVIREGEILQV
142 HHSearch 76.7430%-103 - C1 -2OLJ ? A:[24-240] MIDVHQLKKSF---GS----L-EVL--KGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDG-INLKAKDT--NLNKVREEVGMVFQRFNLFPHMTVLNNITL---APM------K------VRKWP-REKA--E----AKAMELLD---KVGLKDK-AH---AYP--------D----SLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLAN-EGM--TMVVVTHEMGFAREVGDRVLFMDGGYIIEEG
34 PsiBlast_CBE 76.3931%-104 - C1 -2YYZ ? A:[4-201] -IRVVNLKKYF---G-----KVKAV--DGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEI----YFDDVLVND---IPPKYREVGMVFQNYALYPHMTVFENIAFPLRARR------I------S-----K-----D----EVEKRVVEIARKLLIDNL-LD---RKP--------T----QLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQELGI--TSVYVTHDQAEAM-TMASRIAVFNQGKLVQY