@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0330: (2016-03-14 )
LLVEELKTKYLVKDICQILQVPLSTYYRWKKKDFSQSSLEKKIGQLCKAYQFTYGYRKIAALMKQEEQVGINKVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQASQPLEKLTTDITYLYFGDCRLYLSSIMDLYNGEIVAYSIGEKQDTELVLDTLNQLSLPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA

Atome Classification :

(20 SA) ----------------------.........10........20......---..30........40........50........60.....--...70.---.......80........90........100.......110-----------------------------------........120-.-..-....130...---------.-...140...-----....150.---------------------......160......--------..--.170.-----......180.......190.......200.......210-----------.......220.......230.------......240.....--..250.......260.......270
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------LLVEELKTKYLVKDICQILQVPLSTYY---RWKKKDFSQSSLEKKIGQLCKAYQFTYGYRKIAALMKQE--EQVGIN---KVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQ------------------------------------ASQPLEKLTTD-I-TY-LYFGDCRLYL---------S-SIMDLYNGE-----IVAYSIGE---------------------KQDTELV--LDTLNQ--------LS--LPEGS-----LLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAP-----------IECFHSSLKCETFYHKTAYKY------AKSIVIQIVKDYIK--YYNEKRIQQKLGYQSPINFRKQAA
25 HHSearch 72.3717% -37 * C2 *3F9K - POL_HV2RO A:[11-202] ---------------------------------------------------------------------------EEHEKYHSNVKELSHKF-GIPNLV----ARQIVNSCAQCQQKGEAI-----------------HGQ------------------------------------VNAELGTWQMD-C-TH-L----EGKII---------I-VAVHVASGF-----IEAEVIPQ----------------------ESGRQT--ALFLLK--------LASRWPIT------HLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGV-----------VEAMNHHLKNQISRIRE----------QANTIETIVLMAVH--CMNF-KRRGGIGDMTPSERLI---
22 HHSearch 70.5117% -39 - C2 -3OYM POL_FOAMV A:[53-272] ------------------------------------------------------------PQSDRQKIVLQAHN-LAHTGREATLLKIANLYWWPNMRK---DVVKQLGRCQQCLITNASNKASG---------PILRPDR------------------------------------PQKPFDKFFID-Y-IGPLPPSQGYLYV---------L-VVVDGMTGF-----TWLYPTKA----------------------PSTSAT--VKSL-N--------VLTSIAIPK-----VIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGK-----------VERKHSDIKRLLTKLLV---G------RPTKWYDLLPVVQL--ALNN-TYSPVLK-YTPHQLL----
27 HHSearch 68.8016% -65 - C2 -1CXQ A:[7-151] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLGPLQIWQTD-F-TL-EPRMAPRSWL---------A-VTVDTASSA-----IVVTQHGR----------------------VTSVAA--QHHWAT--------AIAVLGRPK-----AIKTDNGSCFTSKSTREWLARWGIAHTTGIPG----QAM-----------VERANRLLKDKIRVLAE--GDGFMKRIPTSKQGELLAKAMY--ALNH--------------------
47 Fugue 67.2821% -2 - C2 -4HHT RNH2_THEMA A:[1-229] ----------------------------------------------GID---ELYKKEFGIVAGVDEASRGCLA-----GPVVAAAVVLEK--EIEGINDSRLLDEIMEKAAVGIGIASPEEIDLYNIFNATKLAMNRALE------------------------------------N------LSVK-P-SF-VLVDGKGIEL---------SVPGTCLVKGDQKSKLIGAASIVA---------------------KVFRDRL--MSEFHR--------MY----PQF-----SFHKHKG--YATKEHLNEIRKNGV-----LPIHRLSFEP-----------VLELLTDDLLREFFEK---------------------GLIS--ENRFERILNLLGARKSVVFRKER-
31 HHSearch 66.8118% -49 - C2 -3KKS POL_BIV29 A:[2-144] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SHLWQMD-N-TH-W----NKTII---------W-VAVETNSGL-----VEAQVIPE----------------------ETALQV--ALCILQ--------LIQRYTV-L-----HLHSDNGPCFTAHRIENLCKYLGITKTTGIPYNPQSQGV-----------VERAHRDLKDRLAAYQ----G------DCETVEAALSLALV--SLNK-KRGG-IGGHTPYEIYL---
46 Fugue 65.3817% -22 - C2 -3BTP VIRE2_AGRFC A:[112-517] RRTDEYILVRQTGQDKFAGTTKCNLDHLPTKAEFNASCRLYRDGVGNYYPPPLAFERIDLPEQLAAQLLEPREQSKQCFQYKLEVWNRAHA--EM-GIT---G-TDIFYQTDKNIKLDRNYKLRPEDRYIQTEKYGRREIQKRYEHQFQAGSLLPDILIKTPQNDIHFSYRFAGDAYANKRFEEFERA-I-KT-KYGSDTEIKLKSKSGIMHDS-KYLESWERG-----SADIRFAEFAGENRAQFPAATVNMGRQPMTRDRHVS--VDYLLQNLPNSPWTQA--LKEGKLWDRVQVLARDGNRYMSPSRLEYSDPEHFTQLMDQVGLPVSMGRQSHAFDRQAAVIVADGPNLREVPDLSPEKLSQ------KDVLIADRNEKGQRTGTYTNVVEYERLMMKLPSDAAQLLA
15 PsiBlast_PDB 62.6123% -35 - C2 -3OS1 POL_FOAMV A:[117-231] -----------------------------------------------------------------------------------------------------------------------------------------RPDR------------------------------------PQKPFDKFFIDYI-GP-LPPSQGYLYV---------L-VVVDGMTGF-----TWLYPTKA---------------------PSTSATVKSLNVLTS--------IA--IPK-------VIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGK-----------VERKNSDIK----------------------------------------------------------
14 PsiBlast_PDB 62.1123% -39 - C2 -3OS0 POL_FOAMV A:[117-231] -----------------------------------------------------------------------------------------------------------------------------------------RPDR------------------------------------PQKPFDKFFIDYI-GP-LPPSQGYLYV---------L-VVVDGMTGF-----TWLYPTKA---------------------PSTSATVKSLNVLTS--------IA--IPK-------VIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGK-----------VERKNSDIK----------------------------------------------------------
26 HHSearch 61.4518% -54 - C2 -1K6Y POL_HV1N5 A:[56-202] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CSPGIWQLD-C-TH-L----EGKVI---------L-VAVHVASGY-----IEAEVIPA----------------------ETGQET--AYFLLK--------LAGRWP-VK-----TVHTDNGSNFTSTTVKAACDWAGIKQED---------GV-----------IESMNKELKKIIGQVR----D------QAEHLKTAVQMAVF--IHNK-KRKGGIGGYSAGERIVD--
28 HHSearch 61.2218% -60 - C2 -1C6V - POL_SIVM1 A:[55-202] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSDLGTWQMD-C-TH-L----EGKIV---------I-VAVHVASGF-----IEAEVIPQ----------------------ETGRQT--ALFLLK--------LAGRWPIT------HLHTDNGANFASQEVKMVAWWAGIEHTFG----------------------EAMNHHLKNQIDRIRE----------QANSVETIVLMAVH--CMNH-KRRGGIGDMTPAERLIN--
17 PsiBlast_PDB 61.1923% -35 - C2 -3OYB POL_FOAMV A:[117-231] -----------------------------------------------------------------------------------------------------------------------------------------RPDR------------------------------------PQKPFDKFFIDYI-GP-LPPSQGYLYV---------L-VVVDGMTGF-----TWLYPTKA---------------------PSTSATVKSLNVLTS--------IA--IPK-------VIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGK-----------VERKNSDIK----------------------------------------------------------
3 PsiBlast_PDB 61.1024% -36 - C2 -3S3O POL_FOAMV A:[117-231] -----------------------------------------------------------------------------------------------------------------------------------------RPDR------------------------------------PQKPFDKFFIDYI-GP-LPPSQGYLYV---------L-VVVDGMTGF-----TWLYPTKA---------------------PSTSATVKSLNVLTS--------IA--IPK-------VIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGK-----------VERKHSDIK----------------------------------------------------------
11 PsiBlast_PDB 60.8023% -39 - C2 -3L2W POL_FOAMV A:[117-231] -----------------------------------------------------------------------------------------------------------------------------------------RPDR------------------------------------PQKPFDKFFIDYI-GP-LPPSQGYLYV---------L-VVVDGMTGF-----TWLYPTKA---------------------PSTSATVKSLNVLTS--------IA--IPK-------VIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGK-----------VERKNSDIK----------------------------------------------------------
30 HHSearch 60.7619% -49 - C2 -2X78 - POL_FOAMV A:[119-279] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QKPFDKFFID-YIGP-LPPSQGYLYV---------L-VVVDGMTGF-----TWLYPTKA----------------------PSTSAT--VKSLNV--------LTS-IAIPR-----VIHSDQGAAFTSSTFAEWAKERGIHLEFST-------SK-----------VERKNSDIKRLLTKLLV---G------RPTKWYDLLPVVQL--ALNN-TYSPVLK-YTPHQLLF---
23 HHSearch 60.6216% -50 - C2 -1EX4 - ? A:[7-152] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSPGIWQLD-C-TH-L----EGKVI---------L-VAVHVASGY-----IEAEVIPA----------------------ETGQET--AYFLLK--------LAGRWP-VK-----TIHTDNGSNFTGATVRAACDWAGIKQEDGIP---QSQGV-----------VESMNKELKKIIGQVRD----------QAEHLKTAVQMAVF--IHNK-KRKGGIGGYSAGERIV---
8 PsiBlast_PDB 60.3223% -32 - C2 -3L2R POL_FOAMV A:[117-231] -----------------------------------------------------------------------------------------------------------------------------------------RPDR------------------------------------PQKPFDKFFIDYI-GP-LPPSQGYLYV---------L-VVVDGMTGF-----TWLYPTKA---------------------PSTSATVKSLNVLTS--------IA--IPK-------VIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGK-----------VERKNSDIK----------------------------------------------------------
29 HHSearch 60.2517% -52 - C2 -3L3U POL_HV1N5 A:[8-153] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPGIWQLD-C-TH-L----EGKVI---------L-VAVHVASGY-----IEAEVIPA----------------------ETGQET--AYFLLK--------LAG-RWPVK-----TVHTDNGSNFTSTTVKAACDWAGIKQEDGIPYNPQSQGV-----------IESMNKELKKIIGQVR----D------QAEHLKTAVQMAVF--IHNH-KRKGGIGGYSAGERIVD--
10 PsiBlast_PDB 60.2423% -39 - C2 -3L2V POL_FOAMV A:[117-231] -----------------------------------------------------------------------------------------------------------------------------------------RPDR------------------------------------PQKPFDKFFIDYI-GP-LPPSQGYLYV---------L-VVVDGMTGF-----TWLYPTKA---------------------PSTSATVKSLNVLTS--------IA--IPK-------VIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGK-----------VERKNSDIK----------------------------------------------------------
2 PsiBlast_PDB 60.2324% -33 - C2 -3OYN POL_FOAMV A:[117-231] -----------------------------------------------------------------------------------------------------------------------------------------RPDR------------------------------------PQKPFDKFFIDYI-GP-LPPSQGYLYV---------L-VVVDGMTGF-----TWLYPTKA---------------------PSTSATVKSLNVLTS--------IA--IPK-------VIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGK-----------VERKHSDIK----------------------------------------------------------
20 PsiBlast_PDB 60.0523% -32 - C2 -3OYE POL_FOAMV A:[117-231] -----------------------------------------------------------------------------------------------------------------------------------------RPDR------------------------------------PQKPFDKFFIDYI-GP-LPPSQGYLYV---------L-VVVDGMTGF-----TWLYPTKA---------------------PSTSATVKSLNVLTS--------IA--IPK-------VIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGK-----------VERKNSDIK----------------------------------------------------------