@TOME V2.3
(Nov 2016)

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2041: (2016-03-31 )
MFKHETVLLHETVDMLEVKPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAKIKLADYSDKVTFIKANFRDMKEALNERGIEAVDGILYDLGVSSPQLDERERGFSYHQDAALDMRMDQEQELTAKTVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERRREVKPIETTGELVDIIKTAIPAPARRKGGHPGKRTFQAIRIAVNDELGAVEDSLEKALTLIKPGGRISVITFHSLEDRITKQLFQEATKGPDLPPGLPVIPDEYKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKIIK

Atome Classification :

(20 SA) .........10........20........30........40........50........60......--..--70........80........90.........100.......110.......120......-------------------.130.......140.......150......-.160.......170.......180.......190-...-....200.......210.......220.......230.......240.......250.......260.......270.......280..-----.....290.......300.......310
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MFKHETVLLHETVDMLEVKPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAKIKLAD--YS--DKVTFIKANFRDMKEALNERG-IEAVDGILYDLGVSSPQLDERERGFSYHQDAALDMRMD-------------------QEQELTAKTVVNEWSYQDLIRIFFQYGEEK-FSKQIAREIERRREVKPIETTGELVDIIKTAIPA-PAR-RKGGHPGKRTFQAIRIAVNDELGAVEDSLEKALTLIKPGGRISVITFHSLEDRITKQLFQEATKGPDLPPGLPVIPDEYKPDFKLATRK-----PIVPSEEELEQNNRARSAKLRVIEKIIK
44 HHSearch 93.6050% -64 * C2 *1WG8 RSMH_THET8 A:[4-284] -MTHVPVLYQEALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKGLHL-------PGLTVVQGNFRHLKRHLAALG-VERVDGILADLGVSSFHLDDPSRGFSYQKEGPLDMRMG-------------------LE-GPTAKEVVNRLPLEALARLLRELGEEP-QAYRIARAIVAAREKAPIETTTQLAEIVRKAVGF-----RRAGHPARKTFQALRIYVNDELNALKEFLEQAAEVLAPGGRLVVIAFHSLEDRVVKRFLRESG-------------------LKVLTKK-----PLVPSEKEAAQNPRARSAKLRAAEKEA-
21 PsiBlast_CBE 92.4645% -65 - C2 -1WG8 RSMH_THET8 B:[5-282] --THVPVLYQEALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAK---GL--HL--PGLTVVQGNFRHLKRHLAALG-VERVDGILADLGVSSFHLDDPSRGFSYQKEGPLDMRMG-------------------LEGP-TAKEVVNRLPLEALARLLRELGEEP-QAYRIARAIVAAREKAPIETTTQLAEIVRKAV----GF-RRAGHPARKTFQALRIYVNDELNALKEFLEQAAEVLAPGGRLVVIAFHSLEDRVVKRFLRES-------------------GLKVLTKK-----PLVPSEKEAAQNPRARSAKLRAAEK---
2 PsiBlast_PDB 91.7445% -62 - C2 -1WG8 RSMH_THET8 A:[4-282] -MTHVPVLYQEALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAK---GL--HL--PGLTVVQGNFRHLKRHLAALG-VERVDGILADLGVSSFHLDDPSRGFSYQKEGPLDMRMG-------------------LEGP-TAKEVVNRLPLEALARLLRELGEEP-QAYRIARAIVAAREKAPIETTTQLAEIVRKAV----GF-RRAGHPARKTFQALRIYVNDELNALKEFLEQAAEVLAPGGRLVVIAFHSLEDRVVKRFLRES-------------------GLKVLTKK-----PLVPSEKEAAQNPRARSAKLRAAEK---
1 PsiBlast_PDB 91.7244% -67 - C2 -3TKA RSMH_ECOLI A:[42-344] ----TTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT-IDD------PRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMD-------------------PTRGQSAAEWLQTAEEADIAWVLKTYGEER-FAKRIARAIVERNREQPMTRTKELAEVVAAATPV-K-------HPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRG----------------------RQLRALGKLMPGEEEVAENPRARSSVLRIAER---
43 HHSearch 91.3344% -69 - C2 -1M6Y RSMH_THEMA A:[8-296] -QRHIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHC-PGCRIIGIDVDSEVLRIAEEKLKE--FS--DRVSLFKVSYREADFLLKTLG-IEKVDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMD-------------------LESEVTAQKVLNELPEEELARIIFEYGEEKRFARRIARKIVENR---PLNTTLDLVKAVREALPS-YEIRRRKRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFRNSK------------------KLRILTEK-----PVRPSEEEIRENPRARSGRLRAAERI--
42 HHSearch 91.2845% -64 - C2 -3TKA RSMH_ECOLI A:[42-346] ----TTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDD-------PRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMD-------------------PTRGQSAAEWLQTAEEADIAWVLKTYGEER-FAKRIARAIVERNREQPMTRTKELAEVVAAATPV-K-------HPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRG-----------------RQLRALG-----KLMPGEEEVAENPRARSSVLRIAERTN-
4 PsiBlast_PDB 89.4040% -67 - C2 -1N2X RSMH_THEMA A:[10-296] ---HIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKE--FS--DRVSLFKVSYREADFLLKTLG-IEKVDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMD-------------------LESEVTAQKVLNELPEEELARIIFEYGEEKRFARRIARKIV---ENRPLNTTLDLVKAVREALPSYEIR-RRKRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFRNSKK------------------LRILTEK-----PVRPSEEEIRENPRARSGRLRAAERI--
3 PsiBlast_PDB 89.1940% -68 - C2 -1M6Y RSMH_THEMA A:[9-296] --RHIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKE--FS--DRVSLFKVSYREADFLLKTLG-IEKVDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMD-------------------LESEVTAQKVLNELPEEELARIIFEYGEEKRFARRIARKIV---ENRPLNTTLDLVKAVREALPSYEIR-RRKRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFRNSKK------------------LRILTEK-----PVRPSEEEIRENPRARSGRLRAAERI--
24 PsiBlast_CBE 56.6031% -70 - C2 -3EEY ? H:[13-102] ---------HDYIKMF-VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTD--LNLIDRVTLIKDGHQNMDKYID-----CPVKAVMFNLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26 PsiBlast_CBE 56.4431% -73 - C2 -3EEY ? E:[13-102] ---------HDYIKMF-VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTD--LNLIDRVTLIKDGHQNMDKYID-----CPVKAVMFNLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 PsiBlast_CBE 56.3631% -71 - C2 -3EEY ? B:[13-106] ---------HDYIKMF-VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTD--LNLIDRVTLIKDGHQNMDKYID-----CPVKAVMFNLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 PsiBlast_CBE 55.8931% -71 - C2 -3EEY ? D:[13-102] ---------HDYIKMF-VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTD--LNLIDRVTLIKDGHQNMDKYID-----CPVKAVMFNLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28 PsiBlast_CBE 55.8231% -72 - C2 -3EEY ? C:[13-102] ---------HDYIKMF-VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTD--LNLIDRVTLIKDGHQNMDKYID-----CPVKAVMFNLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 PsiBlast_CBE 55.8231% -70 - C2 -3EEY ? J:[13-102] ---------HDYIKMF-VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTD--LNLIDRVTLIKDGHQNMDKYID-----CPVKAVMFNLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 55.8231% -72 - C2 -3EEY ? A:[13-102] ---------HDYIKMF-VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTD--LNLIDRVTLIKDGHQNMDKYID-----CPVKAVMFNLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 PsiBlast_CBE 55.5831% -71 - C2 -3EEY ? F:[13-102] ---------HDYIKMF-VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTD--LNLIDRVTLIKDGHQNMDKYID-----CPVKAVMFNLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 54.7427% -76 - C2 -4PON - ? A:[29-128] ----------------------IVIDATMGNGHDTQFLAELVGENGHVYAFDIQESAVANTKERLGEA-YQ--ARTTLFHKSHDKIAKSLPPET-HGKVAAAVFNLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
66 Fugue 52.3522% -42 - C2 -3EEY ? A:[3-197] LTIKNSLGQSHDYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLI--DRVTLIKDGHQNMDKYIDCP-----VKAVMFNLG-YLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQA-NCPPILVCIEKISEGHHHHHH--------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 52.1027% -71 - C2 -4POO ? A:[29-114] ----------------------IVIDATMGNGHDTQFLAELVGENGHVYAFDIQESAVANTKERLGEA-YQ--ARTTLFHKSHDKIAKSLPPET-HGKVAAAVFNLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
47 HHSearch 51.0919% -52 - C2 -1O54 ? A:[104-194] -----------IAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTK--WGLIERVTIKVRDISEGF------D-EKDVDALFLDVPDPWN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------