@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : gbs0138: (2015-11-28 )
MSKEAILNFLQAKGEPTWLQELRLKAFEKIEELELPVIERVKFHRWNLGDGTILENDYTANIPDFTELGNNPKLVQIGTQTVLEQVPMELIEKGVVFTDFYSALEEIPEVIERYFGKARPFEEDRLAAYHTAYFNSGAVLYIPDNVEITQPIEGLFYQDNQSKVPFNKHILLIVGKNAKVSYLERFESIGDGTERTSANISVEVIAQAGSQIKFASIDRLGENVTTFISRRGRHSSDATIDWALGVMNEGNVVADFDSDLIGDGSHANLKVVAASSGRQVQGIDTRVTNYGCNSVGHILQHGVILERGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDANPILLIDENDVTAGHAASIGQVDPEDLYYLMSRGLNQKTAEQLVIRGFLGTVIAEIPVKEVRDEMIAVIDTKLEKR
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10.-......----.20.........30..-......40---------------------........50........60--.------...-....----.70........80........90........100.......----110.---......120.......-130.......140...--....150----.......---..160--......-----..170...----------.----...180...---....190.......200.......210........-----220.......230..-.....240....------------...250------...--....260........---270.......----280..-----...---..290..---......300...-------------..-..310...---....320.......330.......340-----------.........350--.......360..-------.....370--.........380.......390.------......400--------......--------------..410-.......420----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
S
K
E
A
I
L
N
F
L
Q
A-KGE
P
T
W
----
L
Q
-
E
L
R
L
K
A
F
E
K
I
E
E
L-EL
P
V
I
E
R
V
---------------------
K
F
H
R
WNLGD
G
T
I
LENDYTA---N------IP
D
-
F
T
EL----GNN
P
K
L
V
Q
I
G
T
Q
T
V
L
E
QV
P
M
E
L
I
EKGV
V
F
T
D
F
Y
S
A
L
E
E
I
P
E
----
V
I
E
R
---YFGKARPF
E
E
D
R
L
A
A
Y
-
H
T
A
Y
FNS
G
A
V
L
Y
IPDN--
V
E
ITQ------PIE
G
L
F
Y---QDNQ---SKVPFN-----
K
H
I
L
L
I
VG----------K----N
A
K
V
S
Y
L
E
R
---
F
E
S
IGDGTERTSA
N
I
S
V
E
V
I
AQAGSQ-
I
K
F
A
S
I
D
R
-----LG
E
N
V
T
T
F
I
S
RRGRH-SSD
A
T
I
D
W
A
LGV------------MNEG
N
V
------
V
A
D--FDSDL-IGDGSHA
N
L
---
K
V
V
AASSG
R
Q
----
V
QGID-----
T
R
V---TNYG-
C
N
---
S
V
G
H
I
L
QH
G
V
I
L
-------------ER-
G
T
L
T
FNG
I
---
G
H
I
I
KGAKGADAQQE
S
R
V
L
M
L
SDKA-------------RSDAN
P
I
L
L
I
DE--NDVTAGHAASIG-------QV
D
P
E
D
----
L
Y
Y
L
M
SRGL
N
Q
K
T
A
E
Q
L
V
I
R
G
F
L
------
G
T
V
I
A
EI
P
---------
V
K
E
V
R
D
--------------
E
M
I
A
V
-
I
D
T
KLEKR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
HHSearch
81.35
17%
-49
- C4 -
1VH4
-
SUFD_ECOLI
A:
[24-420]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
----
R
S
-
P
Q
A
Q
Q
H
L
Q
Q
L
L
R
T
-
G
L
P
T
R
K
H
------------------------
E
N
W
K
Y
T
P
L
E
G
L
I
N
S
Q
F
V
S
I
A
G
E
I
S
P
Q
Q
R
D
A
L
A
L
T
L
-----
D
S
V
R
L
V
F
V
D
G
R
Y
V
P
-
A
L
S
D
A
T
E
G
S
G
Y
E
V
S
I
N
D
D
R
Q
G
----------------
L
P
--
D
A
I
Q
A
E
V
F
L
H
L
-
T
E
S
L
A
Q
S
V
T
H
I
A
V
K
R
G
--
Q
R
P
A
K
------
P
L
L
L
M
H
I
---
T
Q
G
V
A
G
E
E
V
N
T
A
H
-----
Y
R
H
H
L
D
L
A
----------
E
----
G
A
E
A
T
V
I
E
H
---
F
V
S
L
N
D
--
A
R
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F
T
G
A
R
F
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I
N
V
A
A
N
A
H
-
L
Q
H
I
K
L
A
F
-----
E
N
P
L
S
H
H
F
A
H
N
D
L
L
L
-
A
E
D
A
T
A
F
S
H
S
F
L
------------
L
G
G
A
V
L
------
R
H
N
--
T
S
T
Q
L
-
N
G
E
N
S
T
L
R
I
---
N
S
L
A
M
P
V
K
N
E
----
V
C
D
T
R
-----
T
W
L
---
E
H
N
K
-
G
F
---
C
N
S
R
Q
L
H
K
T
I
V
S
-------------
D
K
-
G
R
A
V
F
N
G
L
---
I
N
V
A
Q
H
A
I
K
T
D
G
Q
M
T
N
N
N
L
L
M
G
K
L
A
-------------
E
V
D
T
K
P
Q
L
E
I
Y
A
--
D
D
V
K
C
S
H
G
A
T
V
G
-------
R
I
D
D
E
Q
----
I
F
Y
L
R
S
R
G
I
N
Q
Q
D
A
Q
Q
M
I
I
Y
A
F
A
------
A
E
L
T
E
A
L
R
---------
D
E
G
L
K
Q
--------------
Q
V
L
A
R
-
I
G
Q
R
L
P
G
G
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38
Fugue
80.10
15%
-46
- C4 -
1VH4
-
SUFD_ECOLI
A:
[9-421]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
A
L
Q
Q
W
H
H
L
-
F
E
A
K
R
------
S
-
P
Q
A
Q
Q
H
L
Q
Q
L
L
R
T
-
G
L
P
T
R
K
H
E
---------------------
N
W
K
Y
T
P
L
--
E
G
L
I
N
S
Q
F
V
S
---
I
------
A
G
E
-
I
S
P
Q
----
Q
R
D
A
L
A
L
T
L
D
S
V
R
L
V
F
V
-------
D
G
R
Y
V
P
A
L
S
D
A
T
E
G
S
G
Y
----
E
V
S
I
N
DD
R
Q
G
L
P
D
A
I
Q
A
E
V
F
L
H
L
-
T
E
S
L
A
Q
S
V
T
H
I
A
V
K
R
G
--
Q
R
P
A
K
------
P
L
L
L
M
H
I
T
Q
G
V
A
G
E
---
E
V
N
T
A
H
-----
Y
R
H
H
L
D
L
A
----------
E
----
G
A
E
A
T
V
I
E
H
---
F
V
S
--
L
N
D
A
R
H
F
T
G
A
R
F
T
I
N
V
A
A
N
A
H
-
L
Q
H
I
K
L
A
F
-----
E
N
P
L
S
H
H
F
A
H
N
D
L
L
L
-
A
E
D
A
T
A
F
S
H
S
F
L
------------
L
G
G
A
V
L
------
R
H
N
--
T
S
T
Q
L
-
N
G
E
N
S
T
L
R
I
---
N
S
L
A
M
P
V
K
N
E
----
V
C
D
T
R
-----
T
W
L
---
E
H
N
K
-
G
F
---
C
N
S
R
Q
L
H
K
T
I
V
S
-------------
D
K
-
G
R
A
V
F
N
G
L
---
I
N
V
A
Q
H
A
I
K
T
D
G
Q
M
T
N
N
N
L
L
M
G
K
L
A
-------------
E
V
D
T
K
P
Q
L
E
I
Y
A
--
D
D
V
K
C
S
H
G
A
T
V
G
-------
R
I
D
D
E
Q
----
I
F
Y
L
R
S
R
G
I
N
Q
Q
D
A
Q
Q
M
I
I
Y
A
F
A
------
A
E
L
T
E
A
L
R
---------
D
E
G
L
K
Q
--------------
Q
V
L
A
R
-
I
G
Q
R
L
P
G
G
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
78.44
26%
-39
- C4 -
2ZU0
-
SUFD_ECOLI
A:
[155-418]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
H
I
T
Q
------
G
V
A
G
-------
E
E
V
---
N
T
A
H
Y
R
-----
H
H
L
D
L
A
E
G
----------
A
----
E
A
T
V
--
I
E
H
---
F
V
S
L
N
D
A
R
H
F
T
G
A
R
F
T
I
N
V
A
A
N
A
H
L
Q
H
I
K
L
A
F
E
N
P
-----
L
S
H
H
---
F
A
H
N
D
L
L
L
-
A
E
D
A
T
A
F
S
H
S
F
L
------------
L
--
G
G
A
------
V
L
R
--
H
N
T
S
T
-
Q
L
N
G
E
N
S
T
L
---
R
I
N
S
L
A
M
P
V
K
----
N
E
V
C
D
-----
T
R
T
W
L
E
H
N
K
G
F
C
N
---
S
--
R
Q
L
H
K
T
I
V
S
-------------
D
K
-
G
R
A
V
F
N
G
L
---
I
N
V
A
Q
H
A
I
K
T
D
G
Q
M
T
N
N
N
L
L
M
G
K
L
A
-------------
E
V
D
T
K
P
Q
L
E
I
Y
A
--
D
D
V
K
C
S
H
G
A
T
V
G
-------
R
I
D
D
E
Q
----
I
F
Y
L
R
S
R
G
I
N
Q
Q
D
A
Q
Q
M
I
I
Y
A
F
A
------
A
E
L
T
E
A
L
R
---------
D
E
G
L
K
Q
--------------
Q
V
L
A
R
-
I
G
Q
R
L
P
G
G
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
78.37
26%
-38
- C4 -
1VH4
-
SUFD_ECOLI
A:
[155-418]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
H
I
T
Q
------
G
V
A
G
-------
E
E
V
---
N
T
A
H
Y
R
-----
H
H
L
D
L
A
E
G
----------
A
----
E
A
T
V
--
I
E
H
---
F
V
S
L
N
D
A
R
H
F
T
G
A
R
F
T
I
N
V
A
A
N
A
H
L
Q
H
I
K
L
A
F
E
N
P
-----
L
S
H
H
---
F
A
H
N
D
L
L
L
-
A
E
D
A
T
A
F
S
H
S
F
L
------------
L
--
G
G
A
------
V
L
R
--
H
N
T
S
T
-
Q
L
N
G
E
N
S
T
L
---
R
I
N
S
L
A
M
P
V
K
----
N
E
V
C
D
-----
T
R
T
W
L
E
H
N
K
G
F
C
N
---
S
--
R
Q
L
H
K
T
I
V
S
-------------
D
K
-
G
R
A
V
F
N
G
L
---
I
N
V
A
Q
H
A
I
K
T
D
G
Q
M
T
N
N
N
L
L
M
G
K
L
A
-------------
E
V
D
T
K
P
Q
L
E
I
Y
A
--
D
D
V
K
C
S
H
G
A
T
V
G
-------
R
I
D
D
E
Q
----
I
F
Y
L
R
S
R
G
I
N
Q
Q
D
A
Q
Q
M
I
I
Y
A
F
A
------
A
E
L
T
E
A
L
R
---------
D
E
G
L
K
Q
--------------
Q
V
L
A
R
-
I
G
Q
R
L
P
G
G
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44
Fugue
63.95
16%
-24
* C7 *
5A1F
14
KDM5B_HUMAN
A:
[1-458]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
M
F
L
P
P
P
E
C
P
V
F
E
P
S
W
----
E
E
F
A
D
P
F
A
F
I
H
K
I
R
P
I
A
E
Q
T
G
I
C
K
V
R
P
PPDWQP
P
F
A
C
D
VDK
L
H
F
T
P
R
I
Q
R
L
N
E
L
E
A
Q
T
R
V
R
D
Y
T
-----------
L
R
T
-
F
G
E
M
----
A
D
A
F
K
S
D
Y
F
N
M
-------
P
V
H
M
V
P
T
E
L
V
E
K
E
F
W
R
L
V
S
T
I
E
E
----
D
V
T
V
---
E
Y
G
A
D
I
A
S
K
E
-----------
F
G
S
G
--
F
P
V
R
D
S
--
P
E
E
E
E
------
Y
L
D
S
G
W
------
N
L
---
N
N
M
P
V
M
-----
E
Q
S
V
L
A
H
I
----------
T
ADIC
G
M
K
L
P
W
L
Y
V
G
M
C
F
S
S
F
C
W
H
I
E
D
H
W
S
-
Y
S
I
N
Y
L
H
W
G
E
P
K
-
T
W
Y
G
V
P
G
Y
-----
A
A
E
Q
L
E
N
V
M
K
K
L
A
P
E
-
L
F
V
S
Q
P
D
L
L
H
Q
L
------------
V
T
I
M
N
P
------
N
T
L
--
M
T
H
E
V
P
V
Y
R
T
N
Q
C
A
G
---
E
F
V
I
T
F
P
R
A
Y
----
H
S
G
F
N
Q
G
F
N
F
A
E
A
---
V
N
F
C
-
T
V
DW
L
P
L
G
R
Q
C
V
E
H
Y
R
L
-------------
L
H
-
R
Y
C
V
F
S
H
D
---
E
M
I
C
K
M
A
S
K
A
D
V
L
D
----
V
V
V
A
S
T
V
-------------
Q
K
D
M
A
--
I
M
I
E
D
--
E
K
A
L
R
E
T
V
R
K
L
G
-------
V
I
D
S
E
R
----
M
D
F
E
L
L
P
-
D
D
E
R
Q
C
V
K
C
K
T
T
C
F
M
------
S
A
I
S
C
S
C
K
PG
L
L
V
C
LHH
V
K
E
L
C
S
CPPYKYKLRYRYT
L
D
D
L
Y
P
-
M
M
N
A
L
K
L
R
A
E----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
47
Fugue
61.82
11%
-16
- C1 -
2JES
26
PORTL_BPSPP
A:
[29-467]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
D
T
T
M
I
Q
K
L
I
D
E
-
H
----------
N
-
P
E
P
L
L
K
G
V
R
Y
Y
M
C
-
E
N
D
I
E
K
K
R
---------------------
R
T
Y
Y
D
A
A
G
Q
Q
L
V
D
D
T
K
--------------------------
T
N
N
R
T
S
H
A
W
H
K
L
F
V
D
Q
K
T
Q
Y
L
V
G
E
P
V
T
F
T
---
S
D
N
K
T
L
L
E
----
Y
V
N
E
---
L
A
D
D
D
F
D
D
I
L
N
E
T
V
K
N
-
M
S
N
K
G
I
E
Y
W
H
P
F
V
D
E
E
--
G
E
F
D
Y
------
V
I
F
P
--
A
---
E
E
M
I
---
V
V
Y
W
G
R
-----
V
P
I
I
P
F
K
N
----------
N
----
E
E
M
V
S
D
L
K
F
---
Y
K
D
L
I
D
N
Y
D
S
I
T
S
S
T
M
D
S
F
S
D
F
Q
Q
I
V
-
Y
V
L
K
N
Y
D
G
--------------
E
N
P
K
E
F
-
T
A
N
L
R
Y
H
S
V
I
K
V
------------
S
G
D
G
G
-------
V
D
T
--
L
R
A
E
I
-
P
V
D
S
A
A
K
E
L
---
E
R
I
Q
D
E
L
Y
K
S
----
A
Q
A
V
D
-----
N
S
P
---
E
T
I
G
-
G
G
---
A
T
----------------------------------------
G
P
A
L
E
K
L
Y
A
L
L
D
L
K
A
N
M
A
E
R
K
I
-------------
R
A
G
L
R
L
F
F
W
F
F
A
--
E
Y
L
R
N
T
G
K
G
D
F
N
-------
P
D
K
E
L
T
----
M
T
F
T
R
T
R
I
Q
N
D
S
E
I
V
Q
S
L
V
Q
G
V
T
G
GIMS
K
E
T
A
V
A
R
N
P
---------
F
V
Q
D
P
E
--------------
E
E
L
A
R
-
I
E
E
E
M
N
Q
Y
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42
Fugue
60.88
19%
-19
* C6 *
4UMW
2
?
A:
[124-730]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLKEN
L
P
L
I
T
L
I
V
M
M
A
I
S
W
G
L
E
Q
FN
H
P
F
G
Q
L
A
F
I
A
T
T
L
V
G
L
Y
P
I
A
R
Q
A
L
R
L
I
K
S
GSYFA
I
E
T
L
M
S
V
A
A
I
G
A
L
F
I
GA
T
A
E
A
A
M
V
L
L
L
F
L
I
G
-
E
R
L
E
G
W
A
ASR
V
S
-
A
L
M
A
L
K
P
E
T
A
T
R
L
-
R
N
G
E
R
E
E
V
---------------------
A
I
N
S
L
R
P
G
D
--
V
I
E
V
A
A
G
G
---
R
------
L
P
A
-
D
G
K
L
LSP
F
A
S
F
D
E
S
A
L
T
G
E
S
I
P
V
E
R
A
T
G
D
K
V
P
A
G
A
T
S
V
D
R
L
V
T
L
E
V
L
S
E
PGAS
A
I
D
R
---
I
L
K
L
I
E
E
A
E
E
R
R
A
P
I
E
R
F
I
D
R
F
S
R
I
Y
T
P
A
I
M
A
V
--
A
L
L
V
T
------
L
V
P
P
L
L
F
---
A
A
S
W
---
Q
E
W
I
Y
K
-----
G
L
T
L
L
L
I
G
----------
C
PC--
A
L
V
I
S
T
P
A
A
---
I
T
S
G
L
A
A
A
A
R
R
G
A
L
I
K
G
G
A
A
L
E
Q
L
G
R
-
V
T
Q
V
A
F
D
K
TGTLT
V
G
K
P
R
V
T
A
I
H
P
A
T
G
I
-
S
E
S
E
L
L
T
L
A
A
A
V
E
QGATH
P
L
A
Q
A
I
V
R
E
A
Q
V
A
ELAIP
T
A
E
--
S
Q
R
A
L
-
V
G
S
G
I
E
A
Q
V
NG
E
R
V
L
I
C
A
A
G
K
H
PADA
F
A
G
L
I
-----
N
E
L
---
E
S
A
G
--
Q
---
T
V
V
L
V
V
R
N
D
D
V
L
G
I
I
A
L
Q
DTLRAD
A
A
T
-
A
I
S
E
L
N
A
L
G
V
K
G
V
I
L
T
G
D
N
P
R
A
A
A
A
I
A
G
E
L
G
L
E
F
K
A
GLL
P
E
D
K
V
K
A
V
T
K
L
N
Q
H
A
P
L
A
M
V
G
D
GI
N
D
A
P
A
M
K
A
A
A
I
G
I
A
M
GSGT
D
V
A
L
E
T
----
A
D
A
A
L
T
H
N
H
L
R
G
L
V
Q
M
I
E
L
A
R
A
T
------
H
A
N
I
R
Q
N
I
---------
T
I
A
L
G
L
--------------
K
G
I
F
L
-
V
T
T
L
L
G
M
T
G
L
W
L
A
V
L
A
D
T
G
A
T
V
L
V
T
A
N
A
L
RLLR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41
Fugue
56.49
17%
-34
- C2 -
4DDU
3
RGYR_THEMA
A:
[2-1103]
AVN
S
K
Y
H
HSCINCGGLNT
D
E
R
N
E
R
GLPCEVCLPEDSPSD
I
Y
R
A
L
L
E
R
KTLKE
Y
R
F
Y
H
E
F
W
N
E
Y
E
D
F
R
S
F
F
K
K
K
F
G
K
D
L
T
G
Y
Q
R
L
W
A
K
R
I
V
Q
G
K
S
F
T
MVAPTGVG
K
T
T
F
G
M
M
T
A
L
W
L
A
R
K
G
K
K
S
A
L
V
F
PT
V
T
L
V
K
Q
T
L
E
R
L
Q
K
L
ADEK
V
K
I
F
G
F
Y
SSMK
K
E
E
K
E
K
F
E
K
S
F
E
EDDYH
I
L
V
F
S
T
Q
F
V
S
K
N
R
E
K
L
S
Q
KRFD
F
V
F
V
DD
V
D
A
V
L
KA
S
R
N
I
D
T
L
L
M
M
VGIP
E
E
I
I
R
K
A
F
S
T
I
K
Q
G
K
I
Y
E
R
PKN
L
K
P
G
I
L
V
V
S
S
ATAKPRGIRP
L
L
F
R
D
L
LNFTVGRLVSVARN
I
T
H
V
R
I
SSRS
K
E
K
L
V
E
L
L
E
I
F
RDG
I
L
I
F
A
QT
E
E
E
G
K
E
L
Y
E
Y
L
K
R
F
KFNVGETWSEF
E
K
N
F
E
D
F
K
V
GKIN
I
L
I
G
V
Q
A
Y
Y
G
K
L
TRGVDLPERIK
Y
V
I
F
WG
T
P
S
M
R
F
S
LELDK
A
P
R
F
V
L
A
R
V
L
K
E
-
M
G
L
I
K
A
----
Q
E
-
N
P
D
V
E
E
L
R
K
I
A
K
E
-
H
L
T
Q
K
E
F
V
---------------------
E
K
V
K
E
M
F
R
G
V
V
V
K
D
E
D
L
E
L
---
I
------
I
P
D
-
V
Y
T
Y
----
I
Q
A
S
G
-------------
R
S
S
R
I
L
N
G
V
L
V
K
G
V
S
V
I
F
E
E
D
E
E
----
I
F
E
S
---
L
K
T
R
L
L
L
I
A
E
E
E
I
I
E
E
-
A
E
A
-----------
N
W
--
K
E
L
V
H
------
E
V
E
E
S
R
R
---
R
S
E
R
---
E
L
T
D
T
S
-----
R
S
L
L
I
I
V
E
----------
S
----
P
T
K
A
E
T
L
S
R
---
F
L
--
G
R
A
S
S
R
K
E
R
N
I
I
V
H
E
A
V
T
G
E
G
V
-
I
L
F
T
A
T
--------
R
G
H
V
Y
D
L
V
T
K
G
G
I
H
-----------
G
V
------------
E
E
E
N
G
K
------
F
V
-----------------------
P
V
Y
N
S
L
K
R
----
C
R
D
C
G
-----
Y
Q
F
---
T
E
--------------
D
R
D
E
C
P
-------------
V
C
-
S
S
K
N
I
D
D
K
---
T
E
T
L
R
A
L
R
E
I
S
L
--
E
A
D
E
I
L
V
A
T
D
P
-------------
D
V
E
G
E
K
I
S
W
------
D
V
T
Q
Y
L
L
P
S
T
R
-------
S
L
R
R
I
E
----
M
H
E
I
T
R
Y
G
F
K
K
A
R
E
S
V
R
F
V
D
--
F
------
N
L
V
K
A
Q
I
----------
V
R
R
V
Q
D
--------------
R
W
I
G
F
E
L
S
G
K
L
Q
K
R
FGRSNLSAG
R
V
Q
S
T
V
L
G
W
I
V
E
R
E
E
E
Y
K
K
S
E
K
D
F
T
L
L
V
L
E
N
G
V
N
L
E
V
E
G
KIADD
V
V
T
V
V
E
L
Q
E
A
E
E
E
K
N
P
L
P
P
YT
T
S
S
A
L
S
E
I
S
Q
K
L
RLG
V
Q
E
V
M
D
I
L
Q
D
L
F
E
K
GFITYHRTDSTRIS
L
E
G
Q
N
V
A
R
T
Y
L
R
K
I
GKEDI
F
M
G
R
SWSTEGAHEAIRPVKPID
A
R
E
L
E
E
M
I
E
E
GLIADLT
K
K
H
L
R
V
Y
E
L
I
F
N
R
F
L
A
S
Q
S
A
A
V
K
V
K
K
Q
I
V
T
V
D
V
DG
K
R
M
G
I
E
Q
I
V
E
ILRDGWNLF
V
P
L
T
V
S
P
R
F
E
H
R
T
Y
K
I
K
E
K
K
F
Y
K
K
H
T
V
P
L
F
T
Q
A
S
I
V
E
E
M
K
K
R
GIGRPST
Y
A
K
I
V
E
V
L
F
R
R
GY
V
Y
E
D
KYK
R
V
R
P
T
R
F
G
V
M
V
Y
S
Y
L
K
E
RYEKYVT
E
E
T
T
R
R
L
E
E
I
M
D
K
V
E
R
GEED
Y
Q
A
T
L
R
L
L
Y
E
E
I
K
S
L
M
E
E
30
HHSearch
51.19
13%
-51
- C4 -
1VH4
-
SUFD_ECOLI
A:
[172-352]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
H
H
L
D
L
A
E
G
--
A
E
A
T
--------
V
I
E
H
F
V
---
S
L
N
D
---
A
R
H
F
T
G
-----
A
R
F
T
I
N
V
A
----------
A
----
N
A
H
L
Q
H
I
K
L
---
A
F
E
N
----
P
L
S
H
H
F
A
H
N
D
L
L
L
A
E
D
A
T
-
A
F
S
H
S
F
L
L
-----
G
G
-
A
-
V
L
R
H
N
T
S
T
Q
L
N
G
E
N
S
T
L
R
I
N
S
L
A
------------
M
P
V
K
N
E
------
V
C
D
T
R
T
W
L
E
H
-
N
K
G
F
C
N
S
R
Q
L
H
-
K
T
I
V
S
D
K
G
R
A
----
V
F
N
G
L
-----
I
N
V
---
A
Q
H
A
-
I
K
---
T
D
G
Q
M
T
N
N
N
L
L
M
-------------
G
K
L
A
E
V
D
T
K
P
Q
---
L
E
I
Y
A
D
D
V
K
C
S
H
G
A
T
V
G
R
I
D
D
E
Q
I
F
-------------
Y
L
R
S
R
G
I
N
Q
Q
D
A
--
Q
Q
M
I
I
Y
A
F
A
A
E
L
-------
T
E
A
L
R
D
----
E
G
L
K
Q
Q
V
L
A
R
I
G
Q
R
L
P
G
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_CBE
49.27
37%
-34
- C4 -
4DN7
2
?
B:
[329-418]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
G
N
A
K
G
A
K
G
H
L
E
C
K
G
L
V
L
T
D
K
G
-------------
S
Q
L
A
I
P
I
L
E
A
N
V
--
D
D
I
E
L
T
H
E
A
A
V
G
-------
K
I
A
K
D
Q
----
V
E
Y
L
M
A
R
G
L
T
E
D
E
A
V
G
M
I
I
R
G
F
L
------
D
V
G
I
R
G
I
P
----------
E
E
L
K
E
--------------
E
I
E
N
T
-
I
A
Q
T
A
L
G
M
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
48.70
31%
-53
- C4 -
3CEI
2
SODF_HELPY
A:
[89-177]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
E
L
K
G
----
A
L
E
K
---
D
F
G
S
L
E
K
F
K
E
D
F
I
K
S
--
A
T
T
L
F
G
S
G
W
N
-
W
A
A
Y
N
--
L
D
-
T
Q
------
K
I
E
I
I
Q
T
---
S
N
A
Q
---
T
P
V
T
D
K
-----
K
V
P
L
L
V
V
D
VWEHAYYIDH
K
----
N
A
R
P
V
Y
L
E
K
---
F
Y
G
H
I
N
W
H
F
V
S
Q
C
Y
E
W
A
K
K
E
G
L
G
S
V
D
-
Y
Y
I
N
E
L
V
H
-----
K
K
L
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
48.50
37%
-42
- C4 -
4DN7
2
?
A:
[326-418]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
E
M
I
G
N
A
K
G
A
K
G
H
L
E
C
K
G
L
V
L
T
D
K
G
-------------
S
Q
L
A
I
P
I
L
E
A
N
V
--
D
D
I
E
L
T
H
E
A
A
V
G
-------
K
I
A
K
D
Q
----
V
E
Y
L
M
A
R
G
L
T
E
D
E
A
V
G
M
I
I
R
G
F
L
------
D
V
G
I
R
G
I
P
----------
E
E
L
K
E
--------------
E
I
E
N
T
-
I
A
Q
T
A
L
G
M
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
47.95
28%
-26
- C4 -
2CW2
1
?
A:
[123-211]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
I
A
E
----
L
I
T
R
---
D
F
G
S
F
E
K
F
K
E
D
-
F
S
A
A
-
A
V
G
H
F
G
S
G
W
V
W
L
I
A
D
D
G
K
L
K
I
V
Q
G
H
DAGN
P
I
R
----------
E
---
S
K
T
P
L
M
N
I
D
VW
E
H
A
Y
Y
I
D
Y
----------
R
----
N
A
R
A
Q
Y
V
K
N
---
Y
W
N
L
V
N
W
D
F
V
N
D
N
V
A
K
A
G
I
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45
Fugue
41.25
17%
-22
- C7 -
1R75
-
?
A:
[12-132]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
T
F
K
N
G
K
P
T
V
K
G
T
-
K
T
Y
P
M
F
S
N
I
L
Y
R
I
A
D
T
------
E
------
A
R
R
W
A
F
Y
---
N
D
S
K
---
E
---
L
I
-----
I
H
V
A
V
L
F
D
----------
Y
----
D
S
Q
I
V
P
L
---------
G
D
T
T
A
F
R
I
G
K
Y
L
C
E
V
D
V
R
P
L
E
T
-
Q
M
F
V
E
G
S
V
-----
T
G
W
R
V
D
T
L
E
A
R
T
A
E
D
-
E
R
G
Y
R
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
PsiBlast_CBE
38.83
33%
4
- C4 -
1VZ0
2
SP0J_THET2
D:
[168-209]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
E
R
--
G
E
I
T
A
G
H
A
R
A
L
L
-------
M
L
E
P
E
D
RLWG
L
K
E
I
L
E
K
G
L
S
V
R
Q
A
E
A
L
R
E
R
L
A
M
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
38.62
33%
32
- C- -
1VZ0
-
SP0J_THET2
A:
[168-209]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
E
R
--
G
E
I
T
A
G
H
A
R
A
L
L
-------
M
L
E
P
E
D
R
L
W
G
L
K
E
I
L
E
K
G
L
S
V
R
Q
A
E
A
L
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28
PsiBlast_CBE
37.15
33%
3
- C4 -
1VZ0
2
SP0J_THET2
B:
[168-209]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
E
R
--
G
E
I
T
A
G
H
A
R
A
L
L
-------
M
L
E
P
E
D
RLWG
L
K
E
I
L
E
K
G
L
S
V
R
Q
A
E
A
L
R
E
R
L
A
M
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
PsiBlast_CBE
37.15
33%
5
- C4 -
1VZ0
2
SP0J_THET2
E:
[168-209]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
E
R
--
G
E
I
T
A
G
H
A
R
A
L
L
-------
M
L
E
P
E
D
RLWG
L
K
E
I
L
E
K
G
L
S
V
R
Q
A
E
A
L
R
E
R
L
A
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
PsiBlast_CBE
37.06
33%
9
- C4 -
1VZ0
2
SP0J_THET2
C:
[168-209]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
E
R
--
G
E
I
T
A
G
H
A
R
A
L
L
-------
M
L
E
P
E
D
RLWG
L
K
E
I
L
E
K
G
L
S
V
R
Q
A
E
A
L
R
E
R
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
46
Fugue
36.39
16%
9
- C6 -
2KX7
-
RCSD_ECOLI
A:
[687-797]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
E
R
L
L
D
----
D
V
C
V
---
M
V
D
V
T
S
A
E
I
R
N
I
V
T
R
Q
-
L
E
N
W
---
G
A
T
C
I
T
P
D
E
--
R
L
I
S
Q
------
D
-
Y
D
I
F
L
---
T
D
N
P
---
S
N
L
T
A
S
-----
G
L
L
L
----------------------
S
D
D
E
S
G
---
V
R
E
I
G
P
G
Q
L
C
V
N
F
N
M
S
N
A
M
Q
E
A
V
L
Q
L
-
I
E
V
Q
L
A
Q
E
-----
E
V
T
E
S
R
S
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------