@TOME V2.3
(Nov 2016)

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Rv3887c: (2016-05-24 )
MTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH

Atome Classification :

(20 SA) -----.........10........-20--.-.--......-.30----..--..-.....40...------.....50.------...----..----..60.....-...-70.....-...80.....----...90........100.......110...-....120.......130---.........---140.......-150.......160.......170.......180.......190.......200.......210..-----.....220.......230.......-----240....--...250.......260...---------....270.......280.......290.......300-.......310.......320.......330.......340.......350.......360..-.....370.........380.......390.......400........410......----.420.......430.......440.......450.......460.......470--------........-----480.......490.......500.......--
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -----MTAPHKVAFPARCAVNICY-D---K-H--LCSQVF-PA-----GI--PV-EGFFEGMVEL------FDADLKRK------GFD----GV----ALPAGSYEL-HKI-NGVRLDI-NKSLDELGVQ----DGDTLVLVPRVAGESFEPQYESLSTGLAA-MGKWLGRDGGDRMFA-----PVTSLTAAH---TAMAIIAMAV-GVVLALTLRTRTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAAC-----APPGALGAAHALIGLVVVVLGAITI-----GVATRKR--WQTAVVTAVVTVCGILAAV---------AAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVA-RVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARLVNAV-QVGMCV--GVSLVLPAAVWGVLTPRQPWAWLALLVAGLT-VGLFITQGRGFAAKYQA----VALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPA---------TRFRPIIR-----LTVEWLEVLAMIALLPAAAALGGLFAWLRH--
30 Fugue 71.7720%-108 - C1 -4TXA RC3H1_MOUSE A:[6-399] --------PQWTDFLS-CPI---------------CTQTF-DE-----TIRKPISLGCGHTVCKM------CLNKLHRK-------------------ACPFDQTTI-NT--DIELLPV-NSALLQL--------------VGLCSGVEDTKHYEEAKKCVEE-LALYLKPVLSRPMQR-----KLVTLVHCQLVEEEGRIRAMRA-ARSLGERTVTELILQHQNPQQ-----------LSSNLWAAVRARGCQFLGPARQEEALKLVLLAL-----EDGSALS-RKVLVLFVVQRL--------------EPR--FPQASKTSIGHVVQLLYRA---------SCFKVTKR-----------------------------------------------DSSLMQLKEEFRTYEALRREHDSQIVQIAMEA----------------------GLRI-------------APDQWSSLLY-----------GDQSHKSHMQS----IIDKLQTPASFAQSVQELTIALQRTGDP---------ANLNRLRPHLELLANI---------DPSPDAPP-----PTWEQLE----NGLVAVRTVVHGLVDYIQNHS
29 Fugue 71.7414% -98 - C1 -3TNF ? B:[3-381] -------LDEYEQAIKRAQENIKK-G---E-E--LEKKL--DK-----LE--RQ-GKDLEDKYKT------YEENLE--------GFE----KL----LTDSEELSL-SEI-NEKMEAF-SKDSEKLTQLMEKHKGD------EKTVQSLQREHHDIKAKLAN-LQVLHDAHTGKKSYVNEKGNPVSSLKDAH---LAIN---------------KDQEVVEH-------EGQFYLLQKGQ------WDAIKN---------------NPAA-----LEKAQKDYSQSKHDLATIKMEALIH-----KLSLEME--KQLETINNLIMSTDPKENE---------EATKLLHKHNGLNLKLANLQDMLAVHRKEKSFF----------------------------------------NEKGEEVTSLNDAHYVIGKDQQLFNLG-GKFYPIHKEQKILEKDGKFYLLKQGEDWESI-----------------KDSPEKQKK----AEHDFHKLQYETPMTVKKLVHHNKGLETTIHKERVEETKQQLEDNGKEKIEIA---------NNISK----------------------------------------
26 HHSearch 60.5918%-111 - C2 -2BWF ? A:[4-75] ----------------SLNIHIKS-G---Q-D--KWEVNV-AP-----ES--TV-LQFKEAINKA------NGI--------------------------PVANQRL-I-Y-SGKILKD-DQTVESYHIQ----DGHSVHLVKS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 58.8628% -68 - C2 -4KV2 - ? A:[21-108] ---------------ATTRVTILT-G---R-R--MTDLVL-PA-----AV--PM-ETYIDDTVAV------LSEVLEDTPADVLGGFD----FT----A--QGVWAF-ARP-GSPPLKL-DQSLDDAGVV----DGSLLTLV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 58.6029% -80 - C2 -4KV3 - MALE_ECOLI A:[377-460] -------------------VTILT-G---R-R--MTDLVL-PA-----AV--PM-ETYIDDTVAV------LSEVLEDTPADVLGGFD----FT----A--QGVWAF-ARP-GSPPLKL-DQSLDDAGVV----DGSLLTLV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33 Fugue 57.8917%-108 - C1 -4O6D ? A:[19-377] -------LYFQSNADTGCAIDISR-Q---E-L--RCGSGV-FI-----HN--DV-EAWMDRYKYYPETPQGLAKIIQKA------HKE----GVC---GLRSVSRLE-HQMWEAVKDEL-NTLLKENGV-------DLSVVVEKQEG-----MYKSAPKRLTATANNTFVVDGPETKEC-----PTQNRAWNS---LEVEDFGFGLTSTRMFLKVRESNTTECDSKIIGTAVKNNLAIHSDLSYWIESRLNDT-----WKLERAVLGEVKSCTWPETHTLWGDGILESDLIIPVTLAGPRSNHNRRPGYKTQNQGPWDEGRVEIDFDYCPGTTVTLSESCGHRGPATRTTTESGKLITDWCCRSCTLPPLRYQTDSGCWYGMEIRPQRHDEKTLVQSQVNA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 Fugue 57.2813%-122 - C1 -3CMQ SYFM_HUMAN A:[11-415] PGSVVELLGKSYPQDDHSNLTRKV-L---T-R--VGRNLHNQQ-----HH--PL-WLIKERVKEH------FYKQYVGR------F--------------GTPLFSV-YDN-LSPVVTT-WQNFDSLLIP----ADH----PSRKKGDNY---YLNRTHML--------------------------------------------------------RAHTSAHQWDLLHAGLDAFLVVGDVY-------RRDQIDSQHY-----------------------PIFHQLEAVRLFSKHELF--------AGIKD--GESLQLFEQSSRSAHKQET---------HTMEAVKLVEFDLKQ--TLTRLMAHLFGDELEIRWVD-CYFPFTHPSFEMEINF----------------------HGEWLEVLGCGVMEQQLVNSAGAQDRIGWAF--GLG----------------LERLAMILYDIPDIRLFWCEDERFLKQFCVSNINQKVKFQPLSKYPAVINDISFWLPSENYAENDFYDLVRTIGGDLVEKVDLIDKFVHPKTHKTSHCYRITYRHMERTLSQREVRHIHQALQEAAVQLLGVEGRF-----
8 HHSearch 56.7626% -55 - C2 -4KV2 - ? A:[20-109] --------------MATTRVTILT-G---R-R--MTDLVL-PA-----AV--PM-ETYIDDTVAV------LSEVLEDT------PADVLGGFD----FTAQGVWAF-ARP-GSPPLKL-DQSLDDAGVV----DGSLLTLVS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28 Fugue 56.3926% -55 - C2 -4KV2 - ? A:[20-109] --------------MATTRVTILT-G---R-R--MTDLVL-PA-----AV--PM-ETYIDDTVAV------LSEVLEDT------PAD----VLGGFDFTAQGVWAF-ARP-GSPPLKL-DQSLDDAGVV----DGSLLTLVS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 HHSearch 56.2613% -87 - C2 -4WJQ SUMO1_HUMAN A:[6-79] ---------------EYIKLKVIG-QD--S-S--EIHFKV-KM-----TT--HL-KKLKESYAQR------QGV--------------------------PMNSLRF-L-F-EGQRIAD-NHTPKELGME----EEDVIEVYQE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21 HHSearch 56.1623% -90 - C2 -1YQB - UBQL3_HUMAN A:[17-94] ------------GSPHLIKVTVKT-P---K-D--KEDFSV-TD-----TC--TI-QQLKEEISQR------FKA--------------------------HPDQLVL-I-F-AGKILKD-PDSLAQCGVR----DGLTVHLVIKRQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 HHSearch 55.5718% -91 - C2 -1WXV - A:[4-87] -------------GSSGLTVTVTH-S---N-E--KHDLHV-TSQQGSSEP--VV-QDLAQVVEEV------IGV--------------------------PQSFQKL-I-F-KGKSLKEMETPLSALGIQ----DGCRVMLIGKKNS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 HHSearch 55.1417% -83 - C2 -3PLU HUB1_YEAST A:[20-91] ---------------HMIEVVVND-RL--G-K--KVRVKC-LG-----ED--SV-GDFKKVLSLQ------IGT--------------------------QPNKIVL-QK--GGSVLKD-HISLEDYEVH----DQTNLELY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23 HHSearch 53.0011%-100 - C2 -3A4R NF2IP_MOUSE A:[5-78] --------------SQELRLRVQG-K---E-KHQMLEISL-SP-----DS--PL-KVLMSHYEEA------MGL--------------------------SGHKLSF-F-F-DGTKLSG-KELPADLGLE----SGDLIEVW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 HHSearch 52.9815% -63 * C2 *3V6C UBC_HUMAN B:[11-89] ----------GLVPRGSMQIFVNT-L---TGT--HITLEV-EP-----SD--TI-ENVKAKIQDK------EGI--------------------------PPDQQRL-IF--AGKQLED-GRTLSDYNIQ----KESTLHLVLR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 HHSearch 52.2712% -87 - C2 -2JXX - A:[20-96] -----------TETSQQLQLRVQG-K---EKHQ-TLEVSL-SR-----DS--PL-KTLMSHYEEA------MGL--------------------------SGRKLSF--FF-DGTKLSG-RELPADLGME----SGDLIEVW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 HHSearch 52.1014% -48 - C2 -1V86 - A:[10-90] ---------GGGVGKELVDLKIIW-N---K-T--KHDVKV-PL-----DS--TG-SELKQKIHSI------TGL--------------------------PPAMQKV-MYK--G-LVPE-DKTLREIKVT----SGAKIMVVGSTIS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 HHSearch 52.0813%-104 - C2 -2L76 - NF2IP_HUMAN A:[258-336] ----------LPETPRLFPLKIRC-R---A-D--LVRLPL-RM-----SE--PL-QSVVDHMATH------LGV--------------------------SPSRILL-L-F-GETELSP-TATPRTLKLG----VADIIDCVVLT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 HHSearch 51.2614% -80 - C2 -2AL3 - ASPC1_MOUSE A:[10-83] -----------------SAVSVLAPN---G-R--RHTVKV-TP-----ST--VL-LQVLEDTCRR------QDF--------------------------NPSEYDL-K-F-QRTVLDL-SLQWRFANLP----NNAKLEMVPVSR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 HHSearch 48.7212% -73 - C2 -2BPS - YUKD_BACSU A:[1-78] ---------------SYIDITIDL-KHYNG-S--VFDLRL-SD-----YH--PV-KKVIDIAWQA------QSVSM----------------P-------PREGHWIRVVN-KDKVFSG-ECKLSDCGIT----NGDRLEI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------