@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PA3838: (2016-02-21 )
MLSAKNLKITFNPGTPIETRALRGLSLDIPAGQFVTVIGSNGAGKSTFLNAVSGDLPIDSGQILIDDEDVTRKPVWARANRVARVFQDPMAGTCEDLTIEENMALAQRRGAGRGLGRAVQASMRDGFRESLATLGLGLENRLGDRIGLLSGGQRQAVSLLMAALQPSRILLLDEHTAALDPRTADFVLHLTARIVAEKKLTTMMVTHSMRQALDVGERTVMLHQGQVVLDVSGEQRKGLDVPDLLAMFEKVRGEKLADDALLLG
Atome Classification :
(21 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20........30........40........50.-------.......60...-.....70---.--..---.....80--.......----.90........100...-.---...110.......120-........130.....-..140..-....-.150.......160........170.......180.......190.......200.......210.......220.......-----230...----.....240--......----.250.......260..---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLSA
K
N
L
K
I
T
FNPGTP
I
E
T
R
ALR
G
L
S
LDIPAG
Q
F
V
T
V
IGSNGAGKS
T
F
L
NAV-------SGDLPIDS
G
Q
I
L
-IDDEDVT---R--K
P
---
V
W
A
R
A
N
R
--
V
A
R
V
F
QD----PMAGTCED
L
T
I
E
E
N
M
A
L
-
A
---
Q
RRGAGR
G
L
G
R
A
V
Q
A
--
S
M
R
D
G
F
R
E
S
L
A
T
LGL
G
-
L
E
N
RLGD-RIGL-LSGG
Q
R
Q
A
V
S
L
L
-
M
A
ALQP
S
R
I
L
L
LDEHTAALDPRT
A
D
F
V
L
H
L
T
A
R
I
V
A
EK
K
L
T
T
M
M
V
T
H
S
M
R
Q
A
L
DVG
E
R
T
V
M
L
HQ
G
Q
V
V
L
-----D-VSGE----QRKGLD
V
P
--
D
L
L
A
M
F
----
E
K
VRGEKLADDALLLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
87.89
29%
-107
- C1 -
4MKI
4
ECFA2_CALS4
B:
[7-260]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
K
V
E
N
V
S
F
I
Y
N
E
G
T
P
Y
A
T
V
A
L
K
D
I
N
F
S
I
D
D
E
E
F
V
G
I
I
G
H
T
G
S
G
K
S
T
L
I
Q
Q
L
-------
N
G
L
L
K
P
S
K
G
K
I
Y
-
I
N
G
I
D
I
T
---
D
--
K
K
---
V
S
L
K
D
I
R
K
Q
V
G
L
V
F
Q
Y
----
P
E
Y
Q
L
F
E
E
-
T
V
F
K
D
I
A
F
-
G
---
P
---
S
N
L
G
L
S
---
E
E
--
E
V
K
E
R
V
Y
E
A
M
E
I
V
G
I
S
-
K
E
--
L
A
D
-
K
S
P
F
E
L
S
G
G
Q
K
R
R
V
A
I
A
G
I
L
A
M
R
P
-
K
I
L
I
L
D
E
P
T
A
G
L
D
P
K
G
K
Q
E
I
L
N
K
I
K
E
I
H
D
K
Y
K
M
I
T
I
L
V
S
H
N
M
E
D
I
A
R
I
A
D
K
I
I
V
M
N
R
G
K
I
E
L
I
G
T
P
R
E
-
V
F
R
E
A
E
R
L
E
K
I
G
L
S
V
P
--
Q
I
T
S
L
A
----
R
E
L
R
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
50
Fugue
80.24
29%
-86
- C1 -
4F4C
3
PGP1_CAEEL
A:
[4-1306]
N
G
S
L
R
Q
S
L
R
T
L
D
S
F
SLA
P
E
D
V
L
K
T
A
I
K
T
V
E
D
Y
EGDNIDSNG
E
I
K
I
TRDEVV
N
K
V
S
I
P
Q
L
Y
RYTT
T
L
E
K
L
L
L
F
I
G
T
L
V
A
V
I
T
G
A
G
L
P
L
M
S
I
L
Q
G
K
V
S
Q
A
F
I
N
E
Q
I
V
I
N
N
N
G
S
T
F
LPTGQNYT
K
T
D
F
E
H
D
V
M
N
V
V
W
S
Y
A
A
M
T
V
G
M
W
A
A
G
Q
I
T
V
T
C
Y
L
Y
V
A
E
Q
M
N
N
R
L
R
R
E
F
V
K
S
I
L
R
QE
I
S
W
F
D
T
N
HSGT
L
A
T
K
L
F
D
N
L
E
R
V
K
E
G
T
GD
K
I
G
M
A
F
Q
Y
L
S
Q
F
I
T
G
F
I
V
A
F
T
H
S
W
Q
L
T
L
V
M
L
A
V
T
P
I
Q
A
L
C
G
F
A
I
A
K
S
M
S
T
F
A
I
R
E
T
L
R
Y
A
K
A
G
K
V
V
E
E
T
I
S
S
I
R
T
V
V
S
L
NG
L
R
Y
E
L
E
R
Y
S
T
A
V
E
E
A
K
K
A
G
V
L
K
G
L
F
L
G
I
S
F
G
A
M
Q
A
S
N
F
I
S
F
A
L
A
F
Y
I
G
V
G
W
V
H
D
GSLN
F
G
D
M
L
T
T
F
S
S
V
M
M
G
S
M
A
L
G
L
A
G
P
Q
L
A
V
L
G
T
A
Q
G
A
A
S
G
I
Y
E
V
LDRKPVIDSS
S
K
A
G
R
KDMKIK
G
D
I
T
V
E
N
V
H
F
T
Y
P
S
R
P
D
V
P
I
--
L
R
G
M
N
L
R
V
N
A
G
Q
T
V
A
L
V
G
S
S
G
C
G
K
S
T
I
I
S
L
L
-------
L
R
Y
Y
D
V
L
K
G
K
I
T
-
I
D
G
V
D
V
R
---
D
--
I
N
---
L
E
F
L
R
K
N
--
V
A
V
V
S
Q
E
----
P
---
A
L
F
N
C
T
I
E
E
N
I
S
L
-
G
---
K
E
G
I
T
R
E
E
M
V
A
A
C
K
M
--
A
---
N
A
E
K
F
I
K
T
L
P
N
G
-
Y
N
T
L
V
G
D
-
R
G
T
Q
-
L
S
G
G
Q
K
Q
R
I
A
I
A
-
R
A
L
V
R
N
P
K
I
L
L
L
D
E
A
T
S
A
L
D
A
E
S
E
G
I
V
Q
Q
A
L
D
K
--
A
A
K
G
R
T
T
I
I
I
A
H
R
L
S
T
I
R
N
-
A
D
L
I
I
S
C
K
N
G
Q
V
V
E
-----
V
---
G
D
----
H
R
A
L
M
A
Q
Q
--
G
L
Y
Y
D
L
----
V
T
A
Q
T
F
T
D
A
V
D
S
A
A
E
G
ER
I
G
K
D
A
L
S
R
L
K
Q
E
L
E
ENNAQKTN
L
F
E
I
L
Y
H
A
RPH
A
L
S
L
F
I
G
M
S
T
A
T
I
G
G
F
I
Y
P
T
Y
S
V
F
F
T
S
F
M
N
V
F
AGNPADFL
S
Q
G
H
F
W
A
L
M
F
L
V
L
A
A
A
Q
G
I
C
S
F
L
M
T
F
F
M
G
I
A
S
E
S
L
T
R
D
L
R
N
K
L
F
R
N
V
L
S
QHIGFFDSPQNA
S
G
K
I
S
T
R
L
A
T
D
V
P
N
L
R
T
A
I
D
F
R
F
S
T
V
I
T
T
L
V
S
M
V
A
G
I
G
L
A
F
F
Y
G
W
Q
M
A
L
L
I
I
A
I
L
P
I
V
A
F
G
Q
Y
L
R
G
RRFTGKNVKSA
S
E
F
A
D
S
G
K
I
A
I
E
A
I
E
N
V
R
T
V
Q
A
L
AR
E
D
T
F
Y
E
N
F
C
E
K
L
D
I
P
H
K
E
A
I
K
E
A
F
I
Q
G
L
S
Y
G
C
A
S
S
V
L
Y
L
L
N
T
C
A
Y
R
M
G
L
A
L
I
I
TDPPTMQ
P
M
R
V
L
R
V
M
Y
A
I
T
I
S
T
S
TLGFAT
S
Y
F
P
E
Y
A
K
A
T
F
A
G
G
I
I
F
G
M
L
R
KISKIDSLSLAGEKKKLYGK
V
I
F
K
N
V
R
F
A
Y
PERPEIEILK
G
L
S
F
S
V
E
PG
Q
T
L
A
L
V
G
P
S
GCGKST
V
V
A
L
L
E
RFYDTL
G
G
E
I
F
I
DGSEIKTLN
P
E
H
T
R
S
Q
I
A
I
V
S
Q
E
P
T
L
F
DCS
I
A
E
N
I
I
YGLDPSSVT
M
A
Q
V
E
E
A
A
R
L
A
NI
H
N
F
I
A
E
LPEGFETRVGDRGTQLS
G
G
Q
K
Q
R
I
A
I
A
R
A
L
V
R
NPK
I
L
L
L
D
EATSALDT
E
S
E
K
V
V
Q
E
A
L
D
R
A
R
EG
R
T
C
I
V
I
A
HRLNTVMNAD
C
I
A
V
V
S
NGTII
E
K
G
T
H
T
Q
L
M
S
E
K
22
PsiBlast_CBE
73.82
31%
-111
- C1 -
3TIF
7
Y796_METJA
B:
[1-223]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
V
K
L
K
N
V
T
K
T
Y
K
M
G
E
E
I
-
I
Y
A
L
K
N
V
N
L
N
I
K
E
G
E
F
V
S
I
M
G
P
S
G
S
G
K
S
T
M
L
N
I
I
GCLDKPT
E
G
E
V
Y
I
D
N
I
K
T
N
D
L
D
D
D
E
L
T
---
K
---------
I
R
R
D
K
--
I
G
F
V
F
Q
Q
FNLI
P
L
------
L
T
A
L
E
N
V
E
L
-
P
LIF
K
Y
R
G
A
M
S
G
E
E
R
R
K
R
A
-----------
L
E
C
L
K
M
A
E
L
E
E
R
F
A
N
H
K
P
N
Q
-
L
S
G
G
Q
Q
Q
R
V
A
I
A
-
R
A
L
A
N
N
P
P
I
I
L
A
D
Q
P
T
W
A
L
D
S
K
T
G
E
K
I
M
Q
L
L
K
K
L
N
E
E
D
G
K
T
V
V
V
V
T
H
D
I
N
V
A
-
R
F
G
E
R
I
I
Y
L
K
D
G
E
V
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
51
Fugue
73.52
27%
-96
- C1 -
1Z47
1
?
A:
[11-355]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSM
T
I
E
F
V
G
V
E
K
I
Y
P
G
G
A
----
R
S
V
R
G
V
S
F
Q
I
R
E
G
E
M
V
G
L
L
G
P
S
G
S
G
K
T
T
I
L
R
L
I
-------
A
G
L
E
R
P
T
K
G
D
V
W
-
I
G
G
K
R
V
T
---
D
--
L
P
---
P
Q
K
R
--
N
--
V
G
L
V
F
Q
N
----
Y
A
L
F
Q
--
H
M
T
V
Y
D
N
V
S
F
-
G
---
L
R
E
K
R
V
P
------
K
D
--
E
M
D
A
R
V
R
E
L
L
R
F
M
R
L
---
E
S
Y
A
N
R
-
F
P
H
E
-
L
S
G
G
Q
Q
Q
R
V
A
L
A
-
R
A
L
A
P
R
P
Q
V
L
L
F
D
E
P
F
A
A
I
D
T
Q
I
R
R
E
L
R
T
F
V
R
Q
V
H
D
E
M
G
V
T
S
V
F
V
T
H
D
Q
E
E
A
L
E
V
A
D
R
V
L
V
L
H
E
G
N
V
E
Q
-----
F
-
G
T
P
E
----
E
V
Y
E
K
P
G
T
--
L
F
V
A
S
F
IGE-
S
N
V
W
T
R
A
V
Q
N
G
R
I
E
V
A
G
A
A
L
P
V
DPAVSEG
S
E
V
A
V
V
V
R
PKD
V
E
L
Q
P
A
S
EREAHAQVV
R
S
A
F
KGS
Y
S
A
C
W
I
R
T
KD
G
E
V
W
E
V
H
V
P
SADRHRWSPG
A
W
V
H
M
N
V
T
R
W
F
I
F
P
R--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
73.18
25%
-103
- C1 -
1XEF
3
HLYBP_ECOLX
A:
[2-234]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
T
F
R
N
I
R
F
R
Y
K
P
D
S
P
V
---
I
L
D
N
I
N
L
S
I
K
Q
G
E
V
I
G
I
V
G
R
S
G
S
G
K
S
T
L
T
K
L
I
-------
Q
R
F
Y
I
P
E
N
G
Q
V
L
-
I
D
G
H
D
L
A
L--
A
--
D
P
---
N
W
L
R
-
R
Q
--
V
G
V
V
L
Q
D
-------
N
V
L
L
N
R
S
I
I
D
N
I
S
L
-
A
---
N
---
P
G
M
S
V
E
K
V
I
Y
A
--
A
K
L
A
G
A
H
D
F
I
S
E
L
R
E
G
-
Y
N
T
I
V
G
E
-
Q
G
A
G
-
L
S
G
G
Q
R
Q
R
I
A
I
A
-
R
A
L
V
N
N
P
K
I
L
I
F
D
E
A
T
S
A
L
D
Y
E
S
E
H
V
I
M
R
N
M
H
K
I
C
---
K
G
R
T
V
I
I
I
A
A
R
L
S
T
V
K
N
A
D
R
I
I
V
M
E
K
G
K
I
V
--------
E
Q
G
K
----
H
K
E
L
L
S
E
P
--
E
S
L
Y
S
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42
HHSearch
72.97
30%
-103
* C1 *
2OLJ
4
?
A:
[24-245]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
I
D
V
H
Q
L
K
K
S
F
G
S
-----
L
E
V
L
K
G
I
N
V
H
I
R
E
G
E
V
V
V
V
I
G
P
S
G
S
G
K
S
T
F
L
R
C
L
-------
N
L
L
E
D
F
D
E
G
E
I
I
-
I
D
G
I
N
L
K
---
A
KD
T
N
---
L
N
K
V
R
E
E
--
V
G
M
V
F
Q
R
----
F
N
L
--
F
P
H
M
T
V
L
N
N
I
T
L
-
A
---
P
M
K
V
R
K
W
--
P
---
R
E
--
K
A
E
A
K
A
M
E
L
L
D
K
V
G
---
L
K
D
K
A
H
A
-
Y
P
D
S
-
L
S
G
G
Q
A
Q
R
V
A
I
A
-
R
A
L
A
M
E
P
K
I
M
L
F
D
E
P
T
S
A
L
D
P
E
M
V
G
E
V
L
S
V
M
K
Q
L
A
-
N
E
G
M
T
M
V
V
V
T
H
E
M
G
F
A
R
E
V
G
D
R
V
L
F
M
D
G
G
Y
I
I
E
-----
E
-
G
K
P
E
----
D
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44
Fugue
72.39
25%
-101
- C1 -
3TUZ
3
METN_ECOLI
H:
[23-362]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------H
M
I
K
L
S
N
I
T
K
V
F
H
Q
G
-
T
R
T
I
Q
A
L
N
N
V
S
L
H
V
P
A
G
Q
I
Y
G
V
I
G
A
S
G
A
G
K
S
T
L
I
R
C
V
-------
N
L
L
E
R
P
T
E
G
S
V
L
-
V
D
G
Q
E
L
T
TLS
E
--
S
E
---
L
T
K
A
R
R
Q
--
I
G
M
I
F
Q
H
----
F
--
N
L
L
S
S
R
T
V
F
G
N
V
A
L
-
P
---
L
E
L
D
N
T
P
K
------
D
--
E
V
K
R
R
V
T
E
L
L
S
L
V
G
L
---
G
D
K
H
D
S
-
Y
P
S
N
-
L
S
G
G
Q
K
Q
R
V
A
I
A
-
R
A
L
A
S
N
P
K
V
L
L
C
D
Q
A
T
S
A
L
D
P
A
T
T
R
S
I
L
E
L
L
K
D
I
N
R
R
L
G
L
T
I
L
L
I
T
H
E
M
D
V
V
K
R
I
C
D
C
V
A
V
I
S
N
G
E
L
I
E
-----
Q
D
T
V
S
E
----
V
F
S
H
P
K
T
P
--
L
A
Q
K
F
I
----
Q
S
T
L
H
L
D
I
P
E
D
Y
Q
E
R
L
QAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
71.04
25%
-101
- C1 -
2FGJ
2
HLYBP_ECOLX
A:
[8-240]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
T
F
R
N
I
R
F
R
Y
K
P
D
S
P
V
---
I
L
D
N
I
N
L
S
I
K
Q
G
E
V
I
G
I
V
G
R
S
G
S
G
K
S
T
L
T
K
L
I
-------
Q
R
F
Y
I
P
E
N
G
Q
V
L
-
I
D
G
H
D
L
A
L--
A
--
D
P
---
N
W
L
R
-
R
Q
--
V
G
V
V
L
Q
D
-------
N
V
L
L
N
R
S
I
I
D
N
I
S
L
-
A
---
N
---
P
G
M
S
V
E
K
V
I
Y
A
--
A
K
L
A
G
A
H
D
F
I
S
E
L
R
E
G
-
Y
N
T
I
V
G
E
-
Q
G
A
G
-
L
S
G
G
Q
R
Q
R
I
A
I
A
-
R
A
L
V
N
N
P
K
I
L
I
F
D
E
A
T
S
A
L
D
Y
E
S
E
H
V
I
M
R
N
M
H
K
I
C
---
K
G
R
T
V
I
I
I
A
A
R
L
S
T
V
K
N
A
D
R
I
I
V
M
E
K
G
K
I
V
--------
E
Q
G
K
----
H
K
E
L
L
S
E
P
--
E
S
L
Y
S
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
PsiBlast_CBE
70.96
31%
-109
- C1 -
1L2T
4
Y796_METJA
B:
[1-223]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
I
K
L
K
N
V
T
K
T
Y
K
M
G
E
E
I
-
I
Y
A
L
K
N
V
N
L
N
I
K
E
G
E
F
V
S
I
M
G
P
S
G
S
G
K
S
T
M
L
N
I
I
GCLDKPT
E
G
E
V
Y
I
D
N
I
K
T
N
D
L
D
D
D
E
L
T
---
K
---------
I
R
R
D
K
--
I
G
F
V
F
Q
Q
FNLI
P
L
------
L
T
A
L
E
N
V
E
L
-
P
LIF
K
Y
R
G
A
M
S
G
E
E
R
R
K
R
A
-----------
L
E
C
L
K
M
A
E
L
E
E
R
F
A
N
H
K
P
N
Q
-
L
S
G
G
Q
Q
Q
R
V
A
I
A
-
R
A
L
A
N
N
P
P
I
I
L
A
D
Q
P
T
G
A
L
D
S
K
T
G
E
K
I
M
Q
L
L
K
K
L
N
E
E
D
G
K
T
V
V
V
V
T
H
D
I
N
V
A
-
R
F
G
E
R
I
I
Y
L
K
D
G
E
V
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
70.87
31%
-105
- C1 -
3TIF
7
Y796_METJA
A:
[1-223]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
V
K
L
K
N
V
T
K
T
Y
K
M
G
E
E
I
-
I
Y
A
L
K
N
V
N
L
N
I
K
E
G
E
F
V
S
I
M
G
P
S
G
S
G
K
S
T
M
L
N
I
I
G
CLDKPT
E
G
E
V
Y
I
D
N
I
K
T
N
D
L
D
D
D
E
L
T
---
K
---------
I
R
R
D
K
--
I
G
F
V
F
Q
Q
FNLI
P
L
------
L
T
A
L
E
N
V
E
L
-
P
LIF
K
Y
R
G
A
M
S
G
E
E
R
R
K
R
A
-----------
L
E
C
L
K
M
A
E
L
E
E
R
F
A
N
H
K
P
N
Q
-
L
S
G
G
Q
Q
Q
R
V
A
I
A
-
R
A
L
A
N
N
P
P
I
I
L
A
D
Q
P
T
W
A
L
D
S
K
T
G
E
K
I
M
Q
L
L
K
K
L
N
E
E
D
G
K
T
V
V
V
V
T
H
D
I
N
V
A
-
R
F
G
E
R
I
I
Y
L
K
D
G
E
V
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
68.33
25%
-102
- C1 -
1MT0
1
A:
[2-234]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
T
F
R
N
I
R
F
R
Y
K
P
D
S
P
V
---
I
L
D
N
I
N
L
S
I
K
Q
G
E
V
I
G
I
V
G
R
S
G
S
G
K
S
T
L
T
K
L
I
-------
Q
R
F
Y
I
P
E
N
G
Q
V
L
-
I
D
G
H
D
L
A
L--
A
--
D
P
---
N
W
L
R
-
R
Q
--
V
G
V
V
L
Q
D
-------
N
V
L
L
N
R
S
I
I
D
N
I
S
L
-
A
---
N
---
P
G
M
S
V
E
K
V
I
Y
A
--
A
K
L
A
G
A
H
D
F
I
S
E
L
R
E
G
-
Y
N
T
I
V
G
E
-
Q
G
A
G
-
L
S
G
G
Q
R
Q
R
I
A
I
A
-
R
A
L
V
N
N
P
K
I
L
I
F
D
E
A
T
S
A
L
D
Y
E
S
E
H
V
I
M
R
N
M
H
K
I
C
--
K
G
R
T
V
I
I
I
A
H
R
L
S
T
V
K
N
-
A
D
R
I
I
V
M
E
K
G
K
I
V
--------
E
Q
G
K
----
H
K
E
L
L
S
E
P
--
E
S
L
Y
S
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
68.12
31%
-106
- C1 -
1L2T
4
Y796_METJA
A:
[1-223]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
I
K
L
K
N
V
T
K
T
Y
K
M
G
E
E
I
-
I
Y
A
L
K
N
V
N
L
N
I
K
E
G
E
F
V
S
I
M
G
P
S
G
S
G
K
S
T
M
L
N
I
I
G
CLDKPT
E
G
E
V
Y
I
D
N
I
K
T
N
D
L
D
D
D
E
L
T
---
K
---------
I
R
R
D
K
--
I
G
F
V
F
Q
Q
FNLI
P
L
------
L
T
A
L
E
N
V
E
L
-
P
LIF
K
Y
R
G
A
M
S
G
E
E
R
R
K
R
A
-----------
L
E
C
L
K
M
A
E
L
E
E
R
F
A
N
H
K
P
N
Q
-
L
S
G
G
Q
Q
Q
R
V
A
I
A
-
R
A
L
A
N
N
P
P
I
I
L
A
D
Q
P
T
G
A
L
D
S
K
T
G
E
K
I
M
Q
L
L
K
K
L
N
E
E
D
G
K
T
V
V
V
V
T
H
D
I
N
V
A
-
R
F
G
E
R
I
I
Y
L
K
D
G
E
V
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49
Fugue
67.98
25%
-88
- C1 -
1OXS
23
?
C:
[1-352]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MV
R
I
I
V
K
N
V
S
K
V
F
K
K
G
---
K
V
V
A
L
D
N
V
N
I
N
I
E
N
G
E
R
F
G
I
L
G
P
S
G
A
G
K
T
T
F
M
R
I
I
-------
A
G
L
D
V
P
S
T
G
E
L
Y
-
F
D
D
R
L
V
A
SNG
K
--
L
I
---
V
P
P
E
D
R
K
--
I
G
M
V
F
Q
T
----
W
A
L
Y
P
--
N
L
T
A
F
E
N
I
A
F
-
P
---
L
T
------
N
M
K
M
S
K
E
--
E
I
R
K
R
V
E
E
V
A
K
I
L
D
I
---
H
H
V
L
N
H
-
F
P
R
E
-
L
S
G
G
Q
Q
Q
R
V
A
L
A
-
R
A
L
V
K
D
P
S
L
L
L
L
D
E
P
F
S
N
L
D
A
R
M
R
D
S
A
R
A
L
V
K
E
V
Q
S
R
L
G
V
T
L
L
V
V
S
H
D
P
A
D
I
F
A
I
A
D
R
V
G
V
L
V
K
G
--
K
L
-----
V
-
Q
V
G
K
----
P
E
D
L
Y
D
N
P
VS
I
Q
V
A
S
L
IGEI
N
E
L
E
G
K
V
T
N
E
G
V
V
I
G
S
LRFPVSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
67.52
25%
-97
- C1 -
2FGK
2
HLYBP_ECOLX
A:
[8-240]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
T
F
R
N
I
R
F
R
Y
K
P
D
S
P
V
---
I
L
D
N
I
N
L
S
I
K
Q
G
E
V
I
G
I
V
G
R
S
G
S
G
K
S
T
L
T
K
L
I
-------
Q
R
F
Y
I
P
E
N
G
Q
V
L
-
I
D
G
H
D
L
A
L--
A
--
D
P
---
N
W
L
R
-
R
Q
--
V
G
V
V
L
Q
D
-------
N
V
L
L
N
R
S
I
I
D
N
I
S
L
-
A
---
N
---
P
G
M
S
V
E
K
V
I
Y
A
--
A
K
L
A
G
A
H
D
F
I
S
E
L
R
E
G
-
Y
N
T
I
V
G
E
-
Q
G
A
G
-
L
S
G
G
Q
R
Q
R
I
A
I
A
-
R
A
L
V
N
N
P
K
I
L
I
F
D
Q
A
T
S
A
L
D
Y
E
S
E
H
V
I
M
R
N
M
H
K
I
C
--
K
G
R
T
V
I
I
I
A
H
R
L
S
T
V
K
N
-
A
D
R
I
I
V
M
E
K
G
K
I
V
--------
E
Q
G
K
----
H
K
E
L
L
S
E
P
--
E
S
L
Y
S
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
HHSearch
67.04
27%
-90
- C1 -
1OXX
21
?
K:
[3-227]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
I
I
V
K
N
V
S
K
V
F
K
K
G
---
K
V
V
A
L
D
N
V
N
I
N
I
E
N
G
E
R
F
G
I
L
G
P
S
G
A
G
K
T
T
F
M
R
I
I
-------
A
G
L
D
V
P
S
T
G
E
L
Y
-
F
D
D
R
L
V
A
---
S
--
N
G
KLI
V
P
P
E
D
R
K
--
I
G
M
V
F
Q
T
----
W
A
L
--
Y
P
N
L
T
A
F
E
N
I
A
F
-
P
---
L
T
N
M
K
M
S
------
K
E
--
E
I
R
K
R
V
E
E
V
A
K
I
L
D
---
I
H
H
V
L
N
H
-
F
P
R
E
-
L
S
G
A
Q
Q
Q
R
V
A
L
A
-
R
A
L
V
K
D
P
S
L
L
L
L
D
E
P
F
S
N
L
D
A
R
M
R
D
S
A
R
A
L
V
K
E
V
Q
S
R
L
G
V
T
L
L
V
V
S
H
D
P
A
D
I
F
A
I
A
D
R
V
G
V
L
V
K
G
K
L
V
Q
-----
V
-
G
K
P
E
----
D
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
66.43
25%
-102
- C1 -
2FF7
1
A:
[8-240]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
T
F
R
N
I
R
F
R
Y
K
P
D
S
P
V
---
I
L
D
N
I
N
L
S
I
K
Q
G
E
V
I
G
I
V
G
R
S
G
S
G
K
S
T
L
T
K
L
I
-------
Q
R
F
Y
I
P
E
N
G
Q
V
L
-
I
D
G
H
D
L
A
L--
A
--
D
P
---
N
W
L
R
-
R
Q
--
V
G
V
V
L
Q
D
-------
N
V
L
L
N
R
S
I
I
D
N
I
S
L
-
A
---
N
---
P
G
M
S
V
E
K
V
I
Y
A
--
A
K
L
A
G
A
H
D
F
I
S
E
L
R
E
G
-
Y
N
T
I
V
G
E
-
Q
G
A
G
-
L
S
G
G
Q
R
Q
R
I
A
I
A
-
R
A
L
V
N
N
P
K
I
L
I
F
D
E
A
T
S
A
L
D
Y
E
S
E
H
V
I
M
R
N
M
H
K
I
C
--
K
G
R
T
V
I
I
I
A
H
R
L
S
T
V
K
N
-
A
D
R
I
I
V
M
E
K
G
K
I
V
--------
E
Q
G
K
----
H
K
E
L
L
S
E
P
--
E
S
L
Y
S
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28
HHSearch
66.07
29%
-97
- C1 -
2IT1
-
?
A:
[4-220]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
K
L
E
N
I
V
K
K
F
G
N
-----
F
T
A
L
N
N
I
N
L
K
I
K
D
G
E
F
M
A
L
L
G
P
S
G
S
G
K
S
T
L
L
Y
T
I
-------
A
G
I
Y
K
P
T
S
G
K
I
Y
-
F
D
E
K
D
V
T
---
E
--
L
P
---
P
--
K
D
R
N
--
V
G
L
V
F
Q
N
----
W
A
L
--
Y
P
H
M
T
V
Y
K
N
I
A
F
-
P
---
L
E
L
R
K
A
P
------
R
E
--
E
I
D
K
K
V
R
E
V
A
K
M
L
H
---
I
D
K
L
L
N
R
-
Y
P
W
Q
-
L
S
G
G
Q
Q
Q
R
V
A
I
A
-
R
A
L
V
K
E
P
E
V
L
L
L
D
E
P
L
S
N
L
D
A
L
L
R
L
E
V
R
A
E
L
K
R
L
Q
K
E
L
G
I
T
T
V
Y
V
T
H
D
Q
A
E
A
L
A
M
A
D
R
I
A
V
I
R
E
G
E
I
L
Q
-----
V
-
G
T
P
D
----
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
53
Fugue
66.02
28%
-82
- C1 -
3B60
2
MSBA_SALTY
A:
[10-581]
-----------------------------------------------------------------------------W
Q
T
F
R
R
L
W
P
T
I
A
PFK
A
G
L
I
V
A
G
I
A
L
I
L
N
A
A
S
D
T
F
M
L
S
L
LKPLLDDGFGKTDRSVLLW
M
P
L
V
V
I
G
L
M
I
L
R
G
I
T
S
Y
I
S
S
Y
C
I
S
W
V
S
G
K
V
V
M
T
M
R
R
R
L
F
G
H
M
M
G
MPVAFFDKQS
T
G
T
L
L
S
R
I
T
Y
D
S
E
Q
V
A
S
S
S
S
G
A
L
I
T
V
V
R
E
G
A
S
I
I
G
L
F
I
M
M
FYYS
W
Q
L
S
I
I
L
V
V
L
A
P
I
V
S
I
A
I
R
V
V
S
K
R
F
R
S
I
S
K
N
M
Q
N
T
M
G
Q
V
T
T
S
A
E
Q
M
L
K
G
H
KEVLIFGG
Q
E
V
E
T
K
R
F
D
K
V
S
N
K
M
R
L
Q
G
M
K
M
V
S
A
S
S
I
S
D
P
I
I
Q
L
I
A
S
L
A
L
A
F
V
L
Y
A
A
S
FPSVMDSLT
A
G
T
I
T
V
V
F
S
S
M
I
A
L
M
R
P
L
K
S
L
T
N
V
N
A
Q
F
Q
R
G
M
A
A
C
Q
T
L
F
A
I
L
D
SEQEK
D
E
G
K
RVIDRATG
D
L
E
F
R
N
V
T
F
T
Y
P
G
R
---
E
V
P
A
L
R
N
I
N
L
K
I
P
A
G
K
T
V
A
L
V
G
R
S
G
S
G
K
S
T
I
A
S
L
I
-------
T
R
F
Y
D
I
D
E
G
H
I
L
-
M
D
G
H
D
L
R
---
E
--
Y
T
---
L
A
S
L
R
N
Q
--
V
A
L
V
S
Q
N
----
V
---
H
L
F
N
D
T
V
A
N
N
I
A
Y
-
A
-----
R
T
E
E
Y
S
R
E
Q
I
E
E
A
--
A
R
M
A
Y
A
M
D
F
I
N
K
M
D
N
G
-
L
D
T
I
I
G
E
-
N
G
V
L
-
L
S
G
G
Q
R
Q
R
I
A
I
A
-
R
A
L
L
R
D
S
P
I
L
I
L
D
E
A
T
S
A
L
D
T
E
S
E
R
A
I
Q
A
A
L
D
E
L
Q
K
N
R
--
T
S
L
V
I
A
H
R
-
L
S
T
I
E
Q
A
D
E
I
V
V
V
E
D
G
I
I
V
--------
E
R
G
T
----
H
S
E
L
L
A
Q
H
--
G
V
Y
A
Q
L
----
H
K
M
Q
F
G
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30
HHSearch
65.53
28%
-102
- C1 -
2YYZ
3
?
A:
[3-220]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
I
R
V
V
N
L
K
K
Y
F
G
K
-----
V
K
A
V
D
G
V
S
F
E
V
K
D
G
E
F
V
A
L
L
G
P
S
G
C
G
K
T
T
T
L
L
M
L
-------
A
G
I
Y
K
P
T
S
G
E
I
Y
-
F
D
D
V
L
V
N
---
D
--
I
P
---
P
K
--
Y
R
E
--
V
G
M
V
F
Q
N
----
Y
A
L
--
Y
P
H
M
T
V
F
E
N
I
A
F
-
P
---
L
R
A
R
R
I
---
S
---
K
D
--
E
V
E
K
R
V
V
E
I
A
R
K
L
--
L
-
I
D
N
L
L
D
R
-
K
P
T
Q
-
L
S
G
G
Q
Q
Q
R
V
A
L
A
-
R
A
L
V
K
Q
P
K
V
L
L
F
D
E
P
L
S
N
L
D
A
N
L
R
M
I
M
R
A
E
I
K
H
L
Q
Q
E
L
G
I
T
S
V
Y
V
T
H
D
Q
A
E
A
M
T
M
A
S
R
I
A
V
F
N
Q
G
K
L
V
Q
-----
Y
-
G
T
P
D
----
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
65.18
25%
-98
- C1 -
2FFB
1
A:
[8-240]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
T
F
R
N
I
R
F
R
Y
K
P
D
S
P
V
---
I
L
D
N
I
N
L
S
I
K
Q
G
E
V
I
G
I
V
G
R
S
G
S
G
K
S
T
L
T
K
L
I
-------
Q
R
F
Y
I
P
E
N
G
Q
V
L
-
I
D
G
H
D
L
A
L--
A
--
D
P
---
N
W
L
R
-
R
Q
--
V
G
V
V
L
Q
D
-------
N
V
L
L
N
R
S
I
I
D
N
I
S
L
-
A
---
N
---
P
G
M
S
V
E
K
V
I
Y
A
--
A
K
L
A
G
A
H
D
F
I
S
E
L
R
E
G
-
Y
N
T
I
V
G
E
-
Q
G
A
G
-
L
S
G
G
Q
R
Q
R
I
A
I
A
-
R
A
L
V
N
N
P
K
I
L
I
F
D
Q
A
T
S
A
L
D
Y
E
S
E
H
V
I
M
R
N
M
H
K
I
C
--
K
G
R
T
V
I
I
I
A
H
R
L
S
T
V
K
N
-
A
D
R
I
I
V
M
E
K
G
K
I
V
--------
E
Q
G
K
----
H
K
E
L
L
S
E
P
--
E
S
L
Y
S
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
58.72
30%
-97
- C1 -
1JI0
1
?
A:
[20-220]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
A
I
K
G
I
D
L
K
V
P
R
G
Q
I
V
T
L
I
G
A
N
G
A
G
K
T
T
T
L
S
A
I
-------
A
G
L
V
R
A
Q
K
G
K
I
I
-
F
N
G
Q
D
I
T
---
N
--
K
P
---
A
H
V
-
I
N
R
--
M
G
I
A
L
V
P
----
E
G
R
R
I
F
P
E
L
T
V
Y
E
N
L
M
M
G
A
---
Y
N
R
K
D
K
E
G
I
K
R
D
L
E
W
I
F
S
L
F
P
R
L
K
E
R
L
K
Q
L
G
-------------
G
T
-
L
S
G
G
E
Q
Q
M
L
A
I
G
-
R
A
L
M
S
R
P
K
L
L
M
M
D
E
P
S
L
G
L
A
P
I
L
V
S
E
V
F
E
V
I
Q
K
I
N
Q
E
G
T
-
T
I
L
L
V
E
Q
N
A
L
G
A
L
K
V
A
H
Y
G
Y
V
L
E
T
G
Q
I
V
L
-----
E
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------