@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu20070: (2016-07-02 )
MTYESKTGNVKRFVKALQQEFDVEAIEITDDTIINQEFIHITYTIGFGEVPERTLSFINKNKNKIRGVAVSGNKVWGDNYGLAGDKLSAKFHTPLLLKFELSGTKQDLQKIIQEVQLIDKHNTKLDQAQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_A_2(2XOE)
?
[Raw transfer]



FMN_A_2(2X2O)
?
[Raw transfer]



FMN_B_6(4BMP)
?
[Raw transfer]



FMN_A_2(2X2P)
?
[Raw transfer]



FMN_A_2(2XOD)
?
[Raw transfer]



FMN_A_2(2XOD)
?
[Raw transfer]



FMN_B_10(4BMO)
?
[Raw transfer]



FMN_D_4(1RLJ)
NRDI_BACSU
[Raw transfer]



FMN_D_4(1RLJ)
NRDI_BACSU
[Raw transfer]
3 PsiBlast_PDB 91.9746%-110 - C3 -2X2O 10.5 ?
1 PsiBlast_PDB 91.2047%-108 - C3 -2XOD 10.5 ?
4 PsiBlast_PDB 90.4846%-104 - C3 -2X2P 10.5 ?
2 PsiBlast_PDB 89.8547%-103 - C3 -2XOE 11.5 ?
5 PsiBlast_PDB 89.6746%-100 - C3 -4BMO 10.9 ?
6 PsiBlast_PDB 88.6246% -93 - C3 -4BMP 11.4 ?
16 HHSearch 75.0740% -6 - C3 -1RLJ 9.9 NRDI_BACSU
7 PsiBlast_PDB 72.2243% 69 - C3 -1RLJ 9.9 NRDI_BACSU
15 HHSearch 71.8147% 67 - C3 -2XOD 10.5 ?
34 Fugue 71.3939% 49 - C3 -1RLJ - NRDI_BACSU -
17 HHSearch 65.6128% -1 - C3 -4N82 - ? -
14 HHSearch 64.7331% 3 - C3 -3N3A - NRDI_ECOLI -
8 PsiBlast_PDB 62.5230% 15 - C3 -3N39 - NRDI_ECOLI -
10 PsiBlast_PDB 62.0830% 16 - C3 -3N3B - NRDI_ECOLI -
9 PsiBlast_PDB 59.7230% 26 - C3 -3N3A - NRDI_ECOLI -
11 PsiBlast_PDB 58.6027% 30 - C3 -4N82 - ? -
35 Fugue 51.6824% 52 - C3 -4N82 - ? -
27 HHSearch 47.0621% 50 - C3 -1YOB - FLAV_AZOVI -
26 HHSearch 45.6214% 27 - C3 -4OXX - CINC_CITBR -
25 HHSearch 43.7415% 3 - C3 -2MT9 - ? -