@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu33920: (2016-07-27 )
MRKPIIAGNWKMNKTLGEAVSFVEEVKSSIPAADKAEAVVCAPALFLEKLASAVKGTDLKVGAQNMHFEESGAFTGEISPVALKDLGVDYCVIGHSERREMFAETDETVNKKAHAAFKHGIVPIICVGETLEEREAGKTNDLVADQVKKGLAGLSEEQVAASVIAYEPIWAIGTGKSSTAKDANDVCAHIRKTVAESFSQEAADKLRIQYGGSVKPANIKEYMAESDIDGALVGGASLEPQSFVQLLEEGQYE

Atome Classification :

(56 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

G3P_A_3(3UWU)
TPIS_STAAR
[Raw transfer]



G3P_B_5(3UWU)
TPIS_STAAR
[Raw transfer]



PGH_A_3(3YPI)
TPIS_YEAST
[Raw transfer]



PGH_A_2(2VXN)
TPIS_LEIME
[Raw transfer]



PGH_B_4(7TIM)
TPIS_YEAST
[Raw transfer]



PGA_B_4(1BTM)
TPIS_GEOSE
[Raw transfer]



G2H_A_3(3UWZ)
TPIS_STAAR
[Raw transfer]



PGH_A_3(3TAO)
TPIS_MYCTU
[Raw transfer]



PGA_C_3(2BTM)
TPIS_GEOSE
[Raw transfer]



PGA_A_3(1BTM)
TPIS_GEOSE
[Raw transfer]



PGA_D_4(2BTM)
TPIS_GEOSE
[Raw transfer]



PGH_A_3(7TIM)
TPIS_YEAST
[Raw transfer]



PGA_C_3(2BTM)
TPIS_GEOSE
[Raw transfer]



G2H_B_5(3UWZ)
TPIS_STAAR
[Raw transfer]



PGA_C_3(2BTM)
TPIS_GEOSE
[Raw transfer]



3PG_B_6(3UWW)
TPIS_STAAR
[Raw transfer]



3PG_A_4(3UWW)
TPIS_STAAR
[Raw transfer]



PGA_B_4(2YPI)
TPIS_YEAST
[Raw transfer]



PGA_A_3(1SW7)
TPIS_CHICK
[Raw transfer]



PGA_B_4(1SW7)
TPIS_CHICK
[Raw transfer]



PGA_A_3(2J27)
TPIS_TRYBB
[Raw transfer]



13P_A_3(4YMZ)
?
[Raw transfer]



13P_A_3(4YMZ)
?
[Raw transfer]



2PG_A_5(3UWV)
TPIS_STAAR
[Raw transfer]



PGA_A_3(2YPI)
TPIS_YEAST
[Raw transfer]



13P_B_14(4YMZ)
?
[Raw transfer]



PGA_A_3(4FF7)
TPIS_YEAST
[Raw transfer]



PGH_B_4(3YPI)
TPIS_YEAST
[Raw transfer]



2PG_B_7(3UWV)
TPIS_STAAR
[Raw transfer]



PEP_B_4(4OWG)
TPIS_RABIT
[Raw transfer]



CIT_B_5(3M9Y)
TPIS_STAAR
[Raw transfer]



PEP_A_3(4OWG)
TPIS_RABIT
[Raw transfer]



GOL_B_4(3GVG)
TPIS_MYCTU
[Raw transfer]



GOL_A_3(3GVG)
TPIS_MYCTU
[Raw transfer]



UVW_A_4(4MVA)
?
[Raw transfer]



UVW_A_4(4MVA)
?
[Raw transfer]



TRS_H_8(2I9E)
?
[Raw transfer]



PEG_B_9(4MVA)
?
[Raw transfer]



GOL_B_5(3GVG)
TPIS_MYCTU
[Raw transfer]



MRD_A_2(4MKN)
?
[Raw transfer]



TRS_I_9(2I9E)
?
[Raw transfer]



GOL_B_18(4FF7)
TPIS_YEAST
[Raw transfer]



MRD_A_7(4MKN)
?
[Raw transfer]



DMS_C_22(1R2R)
TPIS_RABIT
[Raw transfer]



DMS_B_10(1R2R)
TPIS_RABIT
[Raw transfer]
104 HHSearch 94.4269% -97 - C7 -2BTM 4.0 TPIS_GEOSE
21 PsiBlast_CBE 94.1968% -92 - C7 -2BTM 4.1 TPIS_GEOSE
122 Fugue 94.1368% -97 - C7 -2BTM 4.0 TPIS_GEOSE
1 PsiBlast_PDB 94.1268% -97 - C7 -2BTM 4.0 TPIS_GEOSE
2 PsiBlast_PDB 92.9468% -93 - C7 -1BTM 3.3 TPIS_GEOSE
33 PsiBlast_CBE 92.5361%-102 - C7 -5IBX - ? -
22 PsiBlast_CBE 92.1668% -92 - C7 -1BTM 3.2 TPIS_GEOSE
28 PsiBlast_CBE 91.8361%-100 - C7 -5IBX - ? -
9 PsiBlast_PDB 91.3861%-101 - C7 -5IBX - ? -
110 HHSearch 91.3561%-100 - C7 -5IBX - ? -
10 PsiBlast_PDB 91.2761%-110 - C7 -4Y8F - TPIS_CLOPE -
30 PsiBlast_CBE 91.2661% -97 - C7 -5IBX - ? -
105 HHSearch 91.0561%-107 - C7 -4Y8F - TPIS_CLOPE -
29 PsiBlast_CBE 90.9661% -98 - C7 -5IBX - ? -
32 PsiBlast_CBE 90.6761%-102 - C7 -5IBX - ? -
34 PsiBlast_CBE 89.5261% -95 - C7 -5IBX - ? -
106 HHSearch 89.3848%-108 - C7 -1B9B - PGKT_THEMA -
11 PsiBlast_PDB 87.9949%-108 - C7 -1B9B - PGKT_THEMA -
31 PsiBlast_CBE 87.4761% -95 - C7 -5IBX - ? -
6 PsiBlast_PDB 85.7966% -13 - C7 -3UWW 3.8 TPIS_STAAR
5 PsiBlast_PDB 85.5966% -13 - C7 -3UWV 2.7 TPIS_STAAR
26 PsiBlast_CBE 85.5666% -13 - C7 -3UWV 3.2 TPIS_STAAR
27 PsiBlast_CBE 84.8266% -7 - C7 -3UWU 4.1 TPIS_STAAR
23 PsiBlast_CBE 84.6566% -12 - C7 -3M9Y 2.0 TPIS_STAAR
8 PsiBlast_PDB 84.6266% -11 - C7 -3UWZ 2.2 TPIS_STAAR
4 PsiBlast_PDB 84.4366% -7 - C7 -3UWU 4.3 TPIS_STAAR
25 PsiBlast_CBE 83.3666% -6 - C7 -3UWW 3.3 TPIS_STAAR
116 HHSearch 82.8940% -98 - C7 -2VXN 4.3 TPIS_LEIME
24 PsiBlast_CBE 82.6766% -13 - C7 -3UWZ 2.1 TPIS_STAAR
112 HHSearch 80.7639%-111 - C7 -2J27 2.8 TPIS_TRYBB
113 HHSearch 79.0437%-100 - C7 -4MKN 2.8 ?
103 HHSearch 78.1640% -99 - C7 -4MVA 3.7 ?
72 PsiBlast_CBE 77.9739%-104 - C7 -4MVA 3.7 ?
36 PsiBlast_CBE 77.0445% -12 - C7 -3GVG 2.9 TPIS_MYCTU
71 PsiBlast_CBE 76.9239%-107 - C7 -4MVA 2.0 ?
13 PsiBlast_PDB 76.6245% -12 - C7 -3GVG 2.3 TPIS_MYCTU
15 PsiBlast_PDB 75.0445% -9 - C7 -3TAO 4.0 TPIS_MYCTU
20 PsiBlast_PDB 74.2742% -16 - C7 -4YMZ 3.7 ?
120 HHSearch 74.2043% -16 - C7 -4YMZ 3.7 ?
44 PsiBlast_CBE 73.0542% -13 - C7 -4YMZ 3.7 ?
80 PsiBlast_CBE 72.2242% -5 - C7 -4FF7 2.1 TPIS_YEAST
81 PsiBlast_CBE 71.2642% -9 - C7 -4FF7 3.4 TPIS_YEAST
66 PsiBlast_CBE 70.2442% -10 - C7 -7TIM 3.5 TPIS_YEAST
41 PsiBlast_CBE 69.8845% -0 - C7 -2I9E 3.0 ?
78 PsiBlast_CBE 69.6042% -9 - C7 -3YPI 3.4 TPIS_YEAST
67 PsiBlast_CBE 69.3342% -8 - C7 -7TIM 3.9 TPIS_YEAST
79 PsiBlast_CBE 69.0042% -10 - C7 -3YPI 3.9 TPIS_YEAST
39 PsiBlast_CBE 68.2945% 1 - C7 -2I9E 2.9 ?
91 PsiBlast_CBE 67.9942% 6 - C7 -1R2R 3.2 TPIS_RABIT
89 PsiBlast_CBE 67.5342% 7 - C7 -4OWG 3.2 TPIS_RABIT
69 PsiBlast_CBE 67.4942% -8 - C7 -2YPI 3.6 TPIS_YEAST
92 PsiBlast_CBE 66.6242% 8 - C7 -1R2R 3.5 TPIS_RABIT
68 PsiBlast_CBE 66.1742% -3 - C7 -2YPI 3.8 TPIS_YEAST
96 PsiBlast_CBE 65.7543% 32 - C7 -1SW7 4.2 TPIS_CHICK
88 PsiBlast_CBE 65.4942% 8 - C7 -4OWG 3.2 TPIS_RABIT
97 PsiBlast_CBE 64.6243% 36 - C7 -1SW7 3.2 TPIS_CHICK