@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : OR2M4_HUMAN: (2016-01-13 )
MVWENQTFNSIFILLGIFNHSPTHTFLFSLVLGIFSLALMENISMVLLIYIEKQLHTPMYFLLSQLSLMDLMLICTTLPKMIFSYLSGKKSISLAGCGTQIFFYVSLLGAECFLLAVMAYDRYVAICHPLQYTILMNPKLCVFMTVASWTLGSLDGIIVLAAVLSFSYCSSLEIHHFFCDVAALLPLSCTETSAFERLLVICCVVMLIFPVSVIILSYSHVLRAVIHMGSGESRRKAFTTCSSHLSVVGLYYGAAMFMYMRPASKHTPDQDKMVSAFYTILTPMLNPLIYSLRNKEVFRALQKVLKKRKLI

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_D_4(1XKM)
?
[Raw transfer]
-
44 Fugue 92.0018%-136 - C1 -1F88 - OPSD_BOVIN -
6 PsiBlast_PDB 87.9222%-152 - C1 -3PQR - OPSD_BOVIN -
3 PsiBlast_PDB 87.3522%-143 - C1 -3C9L - OPSD_BOVIN -
5 PsiBlast_PDB 87.2722%-146 - C1 -3DQB - GNAT1_BOVIN (first) -
4 PsiBlast_PDB 87.0522%-140 - C1 -1F88 - OPSD_BOVIN -
7 PsiBlast_PDB 87.0222%-147 - C1 -3PXO - OPSD_BOVIN -
8 PsiBlast_PDB 86.4522%-146 - C1 -4J4Q - GNAT1_BOVIN (first) -
9 PsiBlast_PDB 85.8622%-142 - C1 -4PXF - OPSD_BOVIN -
14 PsiBlast_PDB 85.7922%-142 - C1 -2I35 - OPSD_BOVIN -
2 PsiBlast_PDB 85.4222%-149 - C1 -3CAP - OPSD_BOVIN -
45 Fugue 84.2118%-119 - C1 -1U19 - OPSD_BOVIN -
13 PsiBlast_PDB 83.7422%-141 - C1 -2I36 - OPSD_BOVIN -
39 HHSearch 83.0816%-158 - C1 -2Z73 - OPSD_TODPA -
16 PsiBlast_PDB 83.0122%-132 - C1 -2PED - OPSD_BOVIN -
12 PsiBlast_PDB 82.7022%-137 - C1 -1HZX - OPSD_BOVIN -
11 PsiBlast_PDB 82.5322%-126 - C1 -1GZM - OPSD_BOVIN -
15 PsiBlast_PDB 82.5122%-133 - C1 -2HPY - OPSD_BOVIN -
18 PsiBlast_PDB 82.4222%-136 - C1 -1L9H - OPSD_BOVIN -
10 PsiBlast_PDB 82.3922%-127 - C1 -3OAX - OPSD_BOVIN -
17 PsiBlast_PDB 82.3122%-133 - C1 -2G87 - OPSD_BOVIN -
47 Fugue 28.6757% 369 - C1 -1XKM 3.3 ?