@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : RIPK2_HUMAN: (2015-10-18 )
MNGEAICSALPTIPYHKLADLRYLSRGASGTVSSARHADWRVQVAVKHLHIHTPLLDSERKDVLREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSLNELLHRKTEYPDVAWPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSSKSAPEGGTIIYMPPENYEPGQKSRASIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIPHRARMISLIESGWAQNPDERPSFLKCLIELEPVLRTFEEITFLEAVIQLKKTKLQSVSSAIHLCDKKKMELSLNIPVNHGPQEESCGSSQLHENSGSPETSRSLPAPQDNDFLSRKAQDCYFMKLHHCPGNHSWDSTISGSQRAAFCDHKTTPCSSAIINPLSTAGNSERLQPGIAQQWIQSKREDIVNQMTEACLNQSLDALLSRDLIMKEDYELVSTKPTRTSKVRQLLDTTDIQGEEFAKVIVQKLKDNKQMGLQPYPEILVVSRSPSLNLLQNKSM

Atome Classification :

(11 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_3(4M69)
RIPK3_MOUSE
[Raw transfer]



0LI_A_3(4C8B)
RIPK2_HUMAN
[Raw transfer]



0LI_A_3(4C8B)
RIPK2_HUMAN
[Raw transfer]



0LI_B_5(4C8B)
RIPK2_HUMAN
[Raw transfer]



STI_A_3(4BKJ)
DDR1_HUMAN
[Raw transfer]



ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]



STI_A_4(1T46)
?
[Raw transfer]



Q1A_A_4(4NEU)
RIPK1_HUMAN
[Raw transfer]



Q1A_A_4(4NEU)
RIPK1_HUMAN
[Raw transfer]



V4Z_A_4(4AOJ)
NTRK1_HUMAN
[Raw transfer]



STU_A_3(3P86)
CTR1_ARATH
[Raw transfer]



GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]



ACP_A_2(4F0F)

[Raw transfer]



4K4_A_3(4YZM)
ROCO4_DICDI
[Raw transfer]



0VF_A_2(4FYO)

[Raw transfer]



29L_A_3(4MNF)
BRAF_HUMAN
[Raw transfer]



STU_A_3(3P86)
CTR1_ARATH
[Raw transfer]



831_A_3(3II5)
BRAF_HUMAN
[Raw transfer]



STU_A_3(3PPZ)
CTR1_ARATH
[Raw transfer]



1HX_B_9(4ITJ)
RIPK1_HUMAN
[Raw transfer]



4K5_A_2(4YZN)

[Raw transfer]



1HX_A_3(4ITJ)
RIPK1_HUMAN
[Raw transfer]



1HW_A_3(4ITI)
RIPK1_HUMAN
[Raw transfer]
21 PsiBlast_CBE 99.2299%-123 - C1 -4C8B 11.6 RIPK2_HUMAN
33 HHSearch 98.1099%-127 - C1 -4C8B 11.6 RIPK2_HUMAN
1 PsiBlast_PDB 98.1099%-126 - C1 -4C8B 11.6 RIPK2_HUMAN
2 PsiBlast_PDB 67.7631%-108 - C1 -3P86 4.8 CTR1_ARATH
47 HHSearch 66.3533%-110 - C1 -3P86 5.9 CTR1_ARATH
35 HHSearch 66.1231%-110 - C1 -4ITJ 4.8 RIPK1_HUMAN
36 HHSearch 65.1530% -98 - C1 -4NEU 7.2 RIPK1_HUMAN
3 PsiBlast_PDB 60.4331% -92 - C1 -3PPZ 5.0 CTR1_ARATH
6 PsiBlast_PDB 60.3434% -84 - C1 -4M69 5.3 RIPK3_MOUSE
22 PsiBlast_CBE 58.4532% -91 - C1 -4ITJ 4.5 RIPK1_HUMAN
4 PsiBlast_PDB 57.3832% -85 - C1 -4ITI 1.1 RIPK1_HUMAN