@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-29 )
AVSCGQVSSALSPCISYARGNGASPSVACCSGVRSLASSARSTADKQAACKCIKSAAAGLNAGKAAGIPTKCGVSVPYAISSSVDCSKIR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
30 SP3 95.0968%-110 - C5 -1FK5 6.1 NLTP_MAIZE
11 HHSearch 92.8868%-119 - C5 -1AFH - NLTP_MAIZE -
16 HHSearch 90.4648%-117 - C5 -1BWO 3.7 NLTP1_WHEAT
12 HHSearch 88.9958%-113 - C5 -1T12 - NLTP1_TOBAC -
15 HHSearch 85.8342%-127 - C5 -1SIY - NLTP1_VIGRR -
14 HHSearch 82.9649%-113 - C5 -2ALG 2.4 NLTP1_PRUPE
25 HHSearch 64.0823%-110 - C5 -1SM7 - ? -
23 HHSearch 61.8021%-123 - C5 -1BEA - ITRF_MAIZE -
27 HHSearch 54.5132%-101 - C5 -1PSY - 2SS_RICCO -
3 Fugue 53.3927% -89 - C5 -1L6H - NLTPX_ORYSJ -
24 HHSearch 52.2020%-108 - C5 -1S6D - 2SS8_HELAN -
2 Fugue 51.0025% -71 - C5 -2RKN - DIRL1_ARATH -
17 HHSearch 47.5025% -83 - C5 -2RKN - DIRL1_ARATH -
22 HHSearch 44.5115% -93 - C5 -1B1U - IAAT_ELECO -
4 Fugue 41.3614% -34 - C5 -1W2Q - CONG_ARAHY -
18 HHSearch 41.3232% -72 - C5 -1L6H - NLTPX_ORYSJ -
5 Fugue 39.2022% -46 - C5 -1PSY - 2SS_RICCO -
19 HHSearch 38.0433% -47 - C5 -1N89 - NLT2G_WHEAT -
31 SP3 36.7913% -59 - C4 -1EHX - ? -
8 Fugue 30.9511% -44 - C5 -3F52 - ? -


User Run . : Multi Template Modeling Result:

(2 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
40 94.64100%-108 - C- -M040 - -
38 94.26100%-117 - C- -M038 - -