@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
AVTCGDVTSAIAPCMSYATGQASSPSAGCCSGVRTLNGKASTSADRQAACRCLKNLAGSFKGISMGNVANIPGECGVSVSFPINNNVNCDTLH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
11 SP3 90.5156%-122 - C1 -1FK5 5.8 NLTP_MAIZE
21 HHSearch 89.6857%-120 - C1 -1AFH - NLTP_MAIZE -
24 HHSearch 88.3245%-132 - C1 -2ALG 3.1 NLTP1_PRUPE
22 HHSearch 87.4343%-127 - C1 -1T12 - NLTP1_TOBAC -
26 HHSearch 83.0239%-122 - C1 -1BWO - NLTP1_WHEAT -
25 HHSearch 80.8035%-122 - C1 -1SIY - NLTP1_VIGRR -
34 HHSearch 59.1623%-128 - C1 -1SM7 - ? -
33 HHSearch 54.6720%-169 - C1 -1BEA - ITRF_MAIZE -
35 HHSearch 54.6319% -99 - C1 -1PSY - 2SS_RICCO -
2 Fugue 50.3922% -81 - C1 -2RKN - DIRL1_ARATH -
14 SP3 49.9512%-142 - C1 -1HSS - IAA1_WHEAT -
27 HHSearch 49.3024%-101 - C1 -2RKN - DIRL1_ARATH -
32 HHSearch 47.4615%-115 - C1 -1B1U - IAAT_ELECO -
5 Fugue 47.4420% -48 - C1 -1PSY - 2SS_RICCO -
9 Fugue 45.3019%-112 - C1 -1S6D - 2SS8_HELAN -
16 SP3 45.0817% -84 - C1 -1QPO - NADC_MYCTU -
36 HHSearch 40.8318%-115 - C1 -3OB4 - ? -
13 SP3 40.4018%-101 - C1 -1L6H - NLTPX_ORYSJ -
3 Fugue 39.4723% -94 - C1 -1L6H - NLTPX_ORYSJ -
28 HHSearch 38.4029%-102 - C1 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
44 93.22100%-139 - C- -M044 - -
38 92.43100%-132 - C- -M038 - -
42 91.22100%-133 - C- -M042 - -
40 88.37100%-135 - C- -M040 - -
45 44.36100% - - C- -M045 - -