@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
AVTCGDVTSAIAPCMSYATGKASAPSAGCCSGVRTLNGKASTSADRQAACRCLKNLAGSFKGISMGNAATIPGKCGVSVSFPINTNVNCNNIH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 HHSearch 90.1659%-120 - C1 -1AFH - NLTP_MAIZE -
29 SP3 89.1859%-119 - C1 -1FK5 5.9 NLTP_MAIZE
16 HHSearch 86.7041%-123 - C1 -1BWO 5.0 NLTP1_WHEAT
12 HHSearch 85.8044%-128 - C1 -1T12 - NLTP1_TOBAC -
14 HHSearch 83.7647%-129 - C1 -2ALG 3.1 NLTP1_PRUPE
15 HHSearch 81.0941%-125 - C1 -1SIY - NLTP1_VIGRR -
36 SP3 56.5119% -98 - C1 -1QPO - NADC_MYCTU -
25 HHSearch 55.9923%-115 - C1 -1SM7 - ? -
23 HHSearch 54.9622%-163 - C1 -1BEA - ITRF_MAIZE -
24 HHSearch 51.4122% -99 - C1 -1PSY - 2SS_RICCO -
34 SP3 50.1913%-138 - C1 -1HSS - IAA1_WHEAT -
17 HHSearch 47.0524% -99 - C1 -2RKN - DIRL1_ARATH -
2 Fugue 46.4721% -82 - C1 -2RKN - DIRL1_ARATH -
31 SP3 45.9316% -92 - C1 -1QPO - NADC_MYCTU -
27 HHSearch 45.9116%-121 - C1 -1S6D - 2SS8_HELAN -
4 Fugue 45.3120% -47 - C1 -1PSY - 2SS_RICCO -
22 HHSearch 45.2914%-120 - C1 -1B1U - IAAT_ELECO -
10 Fugue 44.8418%-108 - C1 -1S6D - 2SS8_HELAN -
26 HHSearch 40.8316% -98 - C1 -3OB4 - ? -
30 SP3 40.4119% -97 - C1 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
46 44.29100% - - C- -M046 - -
44 44.29100% - - C- -M044 - -
40 44.29100% - - C- -M040 - -