@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
ALSCSTVYNELMPCLGYVQSGGAVRRACCSGIKTLVSRARAKPDRRAACACLKTVAAAAAGGPYLGRAAGLPGKCGVQPPFKIDPNVNCNAV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
20 HHSearch 93.4648%-119 - C2 -1T12 - NLTP1_TOBAC -
19 HHSearch 93.2548%-135 - C2 -2ALG 4.0 NLTP1_PRUPE
9 SP3 89.6742%-133 - C2 -1FK5 - NLTP_MAIZE -
24 HHSearch 87.6239%-135 - C2 -1BWO - NLTP1_WHEAT -
23 HHSearch 87.2643%-124 - C2 -1SIY - NLTP1_VIGRR -
21 HHSearch 84.6543%-116 - C2 -1AFH - NLTP_MAIZE -
36 HHSearch 71.3718%-142 - C2 -1W2Q - CONG_ARAHY -
32 HHSearch 65.8525%-150 - C2 -1SM7 - ? -
31 HHSearch 63.2328%-128 - C2 -1BEA - ITRF_MAIZE -
5 Fugue 61.6220%-121 - C2 -1S6D - 2SS8_HELAN -
37 HHSearch 61.0919%-148 * C2 *1HSS - IAA1_WHEAT -
11 SP3 57.2716%-131 - C2 -1HSS - IAA1_WHEAT -
3 Fugue 55.3620% -95 - C2 -1PSY - 2SS_RICCO -
38 HHSearch 55.1618%-115 - C2 -2LVF - ? -
34 HHSearch 55.0122%-100 - C2 -1PSY - 2SS_RICCO -
30 HHSearch 53.7217%-123 - C2 -1B1U - IAAT_ELECO -
2 Fugue 52.8124%-108 - C2 -2RKN - DIRL1_ARATH -
33 HHSearch 49.3922%-101 - C2 -3OB4 - ? -
35 HHSearch 48.3719%-137 - C2 -1S6D - 2SS8_HELAN -
7 Fugue 47.9613% -79 - C2 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
40 97.21100%-139 - C- -M040 - -
44 96.36100%-139 - C- -M044 - -
43 92.41100%-146 - C- -M043 - -
46 41.41100% -12 - C- -M046 - -
45 40.00100% -5 - C- -M045 - -