@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-01 )
AISCGAVTGSLGQCYNYLTRGGFIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISYPISARTNCNTVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
11 HHSearch 92.5248%-131 - C2 -2ALG 3.7 NLTP1_PRUPE
29 SP3 90.0547%-128 - C2 -1FK5 4.2 NLTP_MAIZE
12 HHSearch 89.3149%-124 - C2 -1T12 - NLTP1_TOBAC -
15 HHSearch 86.1344%-128 - C2 -1SIY - NLTP1_VIGRR -
13 HHSearch 85.0849%-121 - C2 -1AFH - NLTP_MAIZE -
16 HHSearch 82.3038%-138 - C2 -1BWO - NLTP1_WHEAT -
28 HHSearch 63.8421%-161 * C2 *1HSS - IAA1_WHEAT -
26 HHSearch 59.0320%-134 - C2 -1SM7 - ? -
33 SP3 58.6518%-135 - C2 -1HSS - IAA1_WHEAT -
23 HHSearch 57.2723%-141 - C2 -1BEA - ITRF_MAIZE -
10 Fugue 53.7323% -75 - C2 -1PSY - 2SS_RICCO -
22 HHSearch 52.2624% -83 - C2 -1PSY - 2SS_RICCO -
3 Fugue 50.5927% -69 - C2 -1L6H - NLTPX_ORYSJ -
17 HHSearch 48.3919%-105 - C2 -2RKN - DIRL1_ARATH -
21 HHSearch 46.3615%-131 - C2 -1B1U - IAAT_ELECO -
9 Fugue 44.3215% -88 - C2 -1S6D - 2SS8_HELAN -
2 Fugue 43.4618% -74 - C2 -2RKN - DIRL1_ARATH -
35 SP3 41.0915% -96 - C3 -1QPO - NADC_MYCTU -
30 SP3 39.3319% -59 - C2 -1L6H - NLTPX_ORYSJ -
32 SP3 37.4315% -78 * C3 *1QPO - NADC_MYCTU -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
39 96.26100%-137 - C- -M039 - -
46 94.94100%-147 - C- -M046 - -
40 93.36100%-140 - C- -M040 - -
45 91.72100%-136 - C- -M045 - -
43 86.53100%-138 - C- -M043 - -