@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-06 )
AITCGTVVTRLTPCLTYLRSGGAVAPACCNGVKALNNDAKTTPDRQAACGCLKTASTSISGIQLGNAASLAGKCGVNLPYKISPTIDCSKVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
22 HHSearch 91.9464%-122 - C3 -1T12 - NLTP1_TOBAC -
25 HHSearch 91.7148%-125 - C3 -1SIY - NLTP1_VIGRR -
21 HHSearch 90.7260%-123 - C3 -2ALG 4.0 NLTP1_PRUPE
26 HHSearch 87.8149%-136 - C3 -1BWO 7.0 NLTP1_WHEAT
11 SP3 84.0752%-123 - C3 -1FK5 5.9 NLTP_MAIZE
23 HHSearch 83.0352%-124 - C3 -1AFH - NLTP_MAIZE -
40 HHSearch 65.1527%-142 - C3 -1HSS - IAA1_WHEAT -
15 SP3 61.0221%-120 - C3 -1HSS - IAA1_WHEAT -
36 HHSearch 58.1627%-131 - C3 -1SM7 - ? -
34 HHSearch 57.1421%-138 - C3 -1BEA - ITRF_MAIZE -
27 HHSearch 55.8821%-114 - C3 -2RKN - DIRL1_ARATH -
37 HHSearch 53.6025% -86 - C3 -1PSY - 2SS_RICCO -
5 Fugue 53.2423% -46 - C3 -1PSY - 2SS_RICCO -
2 Fugue 52.0221% -93 - C3 -2RKN - DIRL1_ARATH -
38 HHSearch 51.0920%-101 - C3 -1W2Q - CONG_ARAHY -
8 Fugue 50.7719%-109 - C3 -1S6D - 2SS8_HELAN -
41 HHSearch 50.3718%-105 - C3 -2LVF - ? -
9 Fugue 50.0925%-110 - C3 -1HSS - IAA1_WHEAT -
33 HHSearch 49.4420%-109 - C3 -1S6D - 2SS8_HELAN -
32 HHSearch 48.2616%-122 - C3 -1B1U - IAAT_ELECO -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
46 94.92100%-140 - C- -M046 - -
49 94.44100%-126 - C- -M049 - -
42 93.83100%-130 - C- -M042 - -
48 93.60100%-133 - C- -M048 - -
43 91.04100%-120 - C- -M043 - -