@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
ITCGQVASSLTSCIPFITKGGIVPPSCCAGVKSLNAAAKTTPDRQAVCNCLKSEAGRIGGFNANNAAILPGKCGVSIPYKISTSTNCASIKF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
22 HHSearch 94.7166%-122 - C3 -2ALG 3.9 NLTP1_PRUPE
25 HHSearch 93.4564%-128 - C3 -1SIY - NLTP1_VIGRR -
23 HHSearch 90.1653%-115 - C3 -1T12 - NLTP1_TOBAC -
26 HHSearch 89.2141%-134 - C3 -1BWO - NLTP1_WHEAT -
11 SP3 88.0355%-115 - C3 -1FK5 5.2 NLTP_MAIZE
24 HHSearch 84.1556%-116 - C3 -1AFH - NLTP_MAIZE -
20 SP3 56.9921%-128 - C3 -1HSS - IAA1_WHEAT -
36 HHSearch 53.9427%-120 - C3 -1SM7 - ? -
27 HHSearch 53.8426%-108 - C3 -2RKN - DIRL1_ARATH -
13 SP3 50.7318%-115 - C3 -1QPO - NADC_MYCTU -
38 HHSearch 49.8023%-128 - C3 -1HSS - IAA1_WHEAT -
33 HHSearch 49.7421%-123 - C3 -1BEA - ITRF_MAIZE -
2 Fugue 49.2726% -91 - C3 -2RKN - DIRL1_ARATH -
31 HHSearch 47.1114%-130 - C3 -1B1U - IAAT_ELECO -
10 Fugue 45.9223%-100 - C2 -2OVS - ? -
3 Fugue 44.7323% -90 - C3 -1L6H - NLTPX_ORYSJ -
14 SP3 43.8522% -82 - C3 -1L6H - NLTPX_ORYSJ -
29 HHSearch 42.4525% -83 - C3 -1N89 - NLT2G_WHEAT -
32 HHSearch 41.6924% -75 - C3 -1PSY - 2SS_RICCO -
35 HHSearch 41.4320% -70 - C3 -3OB4 - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
45 98.25100%-128 - C- -M045 - -
40 96.38100%-130 - C- -M040 - -
39 94.72100%-126 - C- -M039 - -
43 92.75100%-120 - C- -M043 - -