@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
AITCGQVSSAIAPCLSYARGTGPAPSASCCSGVRNLKSAASTAADRRAACNCLKNAARGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
10 SP3 93.3285%-111 - C2 -1FK5 6.2 NLTP_MAIZE
20 HHSearch 89.7086%-112 - C2 -1AFH - NLTP_MAIZE -
21 HHSearch 86.7361%-112 - C2 -1T12 - NLTP1_TOBAC -
24 HHSearch 86.0358%-113 - C2 -1BWO 6.4 NLTP1_WHEAT
23 HHSearch 84.8757%-119 - C2 -2ALG 3.5 NLTP1_PRUPE
25 HHSearch 75.1549%-116 - C2 -1SIY - NLTP1_VIGRR -
14 SP3 57.0118%-131 - C2 -1HSS - IAA1_WHEAT -
32 HHSearch 56.8423%-138 - C2 -1BEA - ITRF_MAIZE -
33 HHSearch 54.0625%-113 - C2 -1SM7 - ? -
2 Fugue 51.5524% -67 - C2 -2RKN - DIRL1_ARATH -
3 Fugue 48.7027%-104 - C2 -1L6H - NLTPX_ORYSJ -
36 HHSearch 48.6427% -83 - C2 -1PSY - 2SS_RICCO -
26 HHSearch 48.2421% -81 - C2 -2RKN - DIRL1_ARATH -
31 HHSearch 47.7720%-105 - C2 -1B1U - IAAT_ELECO -
17 SP3 47.0619%-112 - C2 -1QPO - NADC_MYCTU -
4 Fugue 46.6924% -64 - C2 -1PSY - 2SS_RICCO -
5 Fugue 46.0019% -73 - C2 -1S6D - 2SS8_HELAN -
11 SP3 44.4821% -78 - C2 -1L6H - NLTPX_ORYSJ -
35 HHSearch 43.4116%-100 - C2 -1S6D - 2SS8_HELAN -
34 HHSearch 41.8622% -64 - C2 -3OB4 - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
38 95.14100%-118 - C- -M038 - -
42 94.75100%-118 - C- -M042 - -
45 93.41100%-121 - C- -M045 - -
43 93.18100%-118 - C- -M043 - -