@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0412: (2015-12-01 )
MTNQTVRGTKDLLFDEWYRFKYIQQIANRISSLYGFLPAQTPIFEYTEVFMKTLGDGSDIINKEMYTFYDKGGKSITLRPEFTAAIVRLLVEKKLQIPIKLFSTGPAFRYERPQKGRQRQFHQINFEVFGVENPKADIELISLAHHLLTEFNISKNVRLEINSLGDSETIAKYKEVLIPYFKKFQNDLSEDSQNRLTKNPLRILDSKDEKDKLIISDAPKISDYYTRESSDFFEQILNGLTALNIPCTVNSKLVRGLDYYCHTVFEFVIEDFGAQGAVFAGGRYDNLVSSVGGKYTPAIGFAGGIERIMELINYSMKGDRPICLVPIGREAEEHALTLANELRRNGLYVIYEYNGALKNRMKKASQANAKAALIFGNEELGSKTLKIKNMDTGEEKIIAYGNIMENIHQTLLV

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMP_A_3(4RDX)
SYH_THET2
[Raw transfer]



LMR_A_2(3RAC)
?
[Raw transfer]



CHAIN_H_8(1HTT)
SYH_ECOLI
[Raw transfer]
-
CHAIN_E_2(1HTT)
SYH_ECOLI
[Raw transfer]
-
CHAIN_E_2(1HTT)
SYH_ECOLI
[Raw transfer]
-
CHAIN_G_6(1HTT)
SYH_ECOLI
[Raw transfer]
-
CHAIN_F_4(1HTT)
SYH_ECOLI
[Raw transfer]
-
39 HHSearch 94.3239%-108 - C2 -1HTT 3.6 SYH_ECOLI
23 PsiBlast_CBE 93.8739%-109 - C2 -1HTT 3.3 SYH_ECOLI
41 HHSearch 93.6539%-109 - C2 -1QE0 - SYH_STAAU -
22 PsiBlast_CBE 93.1839%-109 - C2 -1HTT 3.6 SYH_ECOLI
40 HHSearch 93.1239%-108 - C2 -1H4V - SYH_THET2 -
1 PsiBlast_PDB 92.9339%-107 - C2 -1HTT 3.6 SYH_ECOLI
21 PsiBlast_CBE 92.8639%-110 - C2 -1HTT 3.3 SYH_ECOLI
3 PsiBlast_PDB 92.3639%-109 - C2 -1KMN - SYH_ECOLI -
26 PsiBlast_CBE 92.2639%-109 - C2 -1KMN - SYH_ECOLI -
31 PsiBlast_CBE 92.2539%-106 - C2 -2EL9 - SYH_ECOLI -
32 PsiBlast_CBE 92.1639%-108 - C2 -2EL9 - SYH_ECOLI -
4 PsiBlast_PDB 92.0339%-109 - C2 -2EL9 - SYH_ECOLI -
28 PsiBlast_CBE 91.9439%-106 - C2 -1KMM - SYH_ECOLI -
27 PsiBlast_CBE 91.9139%-107 - C2 -1KMM - SYH_ECOLI -
30 PsiBlast_CBE 91.7339%-104 - C2 -2EL9 - SYH_ECOLI -
24 PsiBlast_CBE 91.6139%-109 - C2 -1KMN - SYH_ECOLI -
29 PsiBlast_CBE 91.3039%-106 - C2 -1KMM - SYH_ECOLI -
5 PsiBlast_PDB 90.8539%-106 - C2 -1QE0 - SYH_STAAU -
2 PsiBlast_PDB 90.7839%-106 - C2 -1KMM - SYH_ECOLI -
25 PsiBlast_CBE 90.7339%-105 - C2 -1KMN - SYH_ECOLI -
8 PsiBlast_PDB 87.0339% -95 - C2 -4RDX 7.1 SYH_THET2