@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0122: (2016-03-12 )
MTNNKVALVTGGAQGIGFKIAERLVEDGFKVAVVDFNEEGAKAAALKLSSDGTKAIAIKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGGMRFR

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_4(3WYE)
?
[Raw transfer]



NAD_A_3(3WYE)
?
[Raw transfer]



NAD_A_3(3WYE)
?
[Raw transfer]



GOL_A_3(3GED)
?
[Raw transfer]



THJ_A_4(3GED)
?
[Raw transfer]



PG4_A_4(3SJ7)
?
[Raw transfer]



PEG_B_17(3OSU)
FABG_STAAM
[Raw transfer]
25 PsiBlast_CBE 94.2358% -77 - C1 -1GEG - BUDC_KLEPN -
112 HHSearch 92.8856% -79 - C1 -3WYE 11.5 ?
1 PsiBlast_PDB 92.6958% -75 - C1 -1GEG - BUDC_KLEPN -
23 PsiBlast_CBE 92.5558% -76 - C1 -1GEG - BUDC_KLEPN -
2 PsiBlast_PDB 92.4255% -79 - C1 -3WYE 11.5 ?
27 PsiBlast_CBE 92.3158% -75 - C1 -1GEG - BUDC_KLEPN -
24 PsiBlast_CBE 91.9158% -76 - C1 -1GEG - BUDC_KLEPN -
26 PsiBlast_CBE 91.2558% -77 - C1 -1GEG - BUDC_KLEPN -
22 PsiBlast_CBE 90.5358% -75 - C1 -1GEG - BUDC_KLEPN -
21 PsiBlast_CBE 89.6658% -73 - C1 -1GEG - BUDC_KLEPN -
28 PsiBlast_CBE 86.4455% -85 - C1 -3WYE 8.7 ?
30 PsiBlast_CBE 85.4649% -78 - C1 -3A28 - BUDC_CORGT -
34 PsiBlast_CBE 85.4049% -76 - C1 -3A28 - BUDC_CORGT -
29 PsiBlast_CBE 84.5849% -78 - C1 -3A28 - BUDC_CORGT -
32 PsiBlast_CBE 84.1149% -78 - C1 -3A28 - BUDC_CORGT -
35 PsiBlast_CBE 84.0549% -77 - C1 -3A28 - BUDC_CORGT -
3 PsiBlast_PDB 83.6949% -76 - C1 -3A28 - BUDC_CORGT -
31 PsiBlast_CBE 83.3349% -75 - C1 -3A28 - BUDC_CORGT -
33 PsiBlast_CBE 82.7049% -77 - C1 -3A28 - BUDC_CORGT -
4 PsiBlast_PDB 79.5544% -77 - C1 -3WTC - ? -
5 PsiBlast_PDB 73.1240% -77 - C1 -3SJ7 2.1 ?
9 PsiBlast_PDB 67.6139% -73 - C1 -3OSU 2.0 FABG_STAAM
102 HHSearch 60.9130% -80 - C1 -3GED 3.4 ?