@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1012: (2016-03-21 )
MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDSTRTRCAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTYVGDGRNNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMGEPDEVWKERLELLKPYQVNKEMMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREMEVTDEVFESKASVVFQEAENRMHTIKAVMVATLGEF

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PSQ_D_4(1DUV)
OTC1_ECOLI
[Raw transfer]




PSQ_F_6(1DUV)
OTC1_ECOLI
[Raw transfer]




PSQ_E_5(1DUV)
OTC1_ECOLI
[Raw transfer]




PAO_D_4(1OTH)
OTC_HUMAN
[Raw transfer]




PAO_D_4(1OTH)
OTC_HUMAN
[Raw transfer]




CIR_A_5(4JQO)
OTC_VIBVU
[Raw transfer]




CIR_B_11(4JQO)
OTC_VIBVU
[Raw transfer]




CIR_C_16(4JQO)
OTC_VIBVU
[Raw transfer]




CP_A_4(4JFR)
OTC_VIBVU
[Raw transfer]




CP_A_5(4H31)
OTC_VIBVU
[Raw transfer]




PAO_A_2(4A8T)
PTC_ENTFA
[Raw transfer]




PUW_B_9(4A8H)
PTC_ENTFA
[Raw transfer]




CP_G_7(1C9Y)
OTC_HUMAN
[Raw transfer]




CP_B_6(4JFR)
OTC_VIBVU
[Raw transfer]




PUW_A_3(4A8H)
PTC_ENTFA
[Raw transfer]




CP_C_13(2I6U)
OTC_MYCTU
[Raw transfer]




CP_D_4(1EP9)
OTC_HUMAN
[Raw transfer]




CP_C_12(4NF2)
OTC_BACAN
[Raw transfer]




CP_A_9(2I6U)
OTC_MYCTU
[Raw transfer]




CP_A_4(4NF2)
OTC_BACAN
[Raw transfer]




CP_B_10(4NF2)
OTC_BACAN
[Raw transfer]




CP_B_11(2I6U)
OTC_MYCTU
[Raw transfer]




CP_A_9(2I6U)
OTC_MYCTU
[Raw transfer]




CP_J_10(1FVO)
OTC_HUMAN
[Raw transfer]




CP_G_7(1FVO)
OTC_HUMAN
[Raw transfer]




ARG_A_6(4JHX)
OTC_VIBVU
[Raw transfer]




PE5_B_26(4H31)
OTC_VIBVU
[Raw transfer]




1 PsiBlast_PDB 98.6964% -94 - C5 -3UPD - OTC_VIBVU -
27 PsiBlast_CBE 98.2964% -90 - C5 -4JFR - OTC_VIBVU -
21 PsiBlast_CBE 97.8764% -93 - C5 -4KWT - OTC_VIBVU -
25 PsiBlast_CBE 97.4664% -91 - C5 -4JHX - OTC_VIBVU -
28 PsiBlast_CBE 97.1664% -88 - C5 -4JFR 4.6 OTC_VIBVU
24 PsiBlast_CBE 97.0264% -89 - C5 -4JQO 3.7 OTC_VIBVU
4 PsiBlast_PDB 96.9864% -87 - C5 -4JHX 2.8 OTC_VIBVU
22 PsiBlast_CBE 96.9564% -90 - C5 -4KWT - OTC_VIBVU -
3 PsiBlast_PDB 96.9564% -88 - C5 -4JFR 4.7 OTC_VIBVU
2 PsiBlast_PDB 96.6864% -87 - C5 -4H31 5.0 OTC_VIBVU
30 PsiBlast_CBE 96.5264% -85 - C5 -4H31 2.4 OTC_VIBVU
5 PsiBlast_PDB 96.4264% -88 - C5 -4JQO 3.7 OTC_VIBVU
23 PsiBlast_CBE 96.3164% -88 - C5 -4JQO 3.7 OTC_VIBVU
29 PsiBlast_CBE 96.1964% -87 - C5 -4H31 - OTC_VIBVU -
26 PsiBlast_CBE 96.1964% -91 - C5 -4JHX - OTC_VIBVU -
112 HHSearch 92.6658% -83 - C5 -1DXH - OTCC_PSEAE -
9 PsiBlast_PDB 92.4957% -84 - C5 -1DXH - OTCC_PSEAE -
11 PsiBlast_PDB 92.4858% -88 - C5 -2W37 - OTCC_LACHI -
34 PsiBlast_CBE 92.4659% -87 - C5 -2OTC - OTC1_ECOLI -
41 PsiBlast_CBE 92.4358% -85 - C5 -2W37 - OTCC_LACHI -
32 PsiBlast_CBE 92.0759% -83 - C5 -1DUV 6.8 OTC1_ECOLI
31 PsiBlast_CBE 91.9359% -82 - C5 -1DUV 6.7 OTC1_ECOLI
7 PsiBlast_PDB 91.3259% -85 - C5 -1DUV 6.9 OTC1_ECOLI
48 PsiBlast_CBE 78.3936% -82 - C5 -1EP9 5.0 OTC_HUMAN
115 HHSearch 78.3338% -81 - C5 -1OTH 7.4 OTC_HUMAN
49 PsiBlast_CBE 78.1536% -81 - C5 -1C9Y 4.8 OTC_HUMAN
45 PsiBlast_CBE 78.0436% -81 - C5 -1OTH 7.4 OTC_HUMAN
46 PsiBlast_CBE 78.0336% -85 - C5 -1FVO 4.0 OTC_HUMAN
63 PsiBlast_CBE 77.3335% -77 - C5 -4A8T 6.0 PTC_ENTFA
47 PsiBlast_CBE 77.3236% -80 - C5 -1FVO 3.9 OTC_HUMAN
70 PsiBlast_CBE 75.4335% -76 - C5 -4A8H 6.0 PTC_ENTFA
19 PsiBlast_PDB 74.8737% -79 - C5 -4NF2 4.9 OTC_BACAN
71 PsiBlast_CBE 74.6135% -74 - C5 -4A8H 6.2 PTC_ENTFA
43 PsiBlast_CBE 74.4337% -81 - C5 -4NF2 5.0 OTC_BACAN
44 PsiBlast_CBE 73.6237% -77 - C5 -4NF2 4.9 OTC_BACAN
86 PsiBlast_CBE 70.8433% -71 - C5 -2I6U 4.2 OTC_MYCTU
118 HHSearch 70.3934% -73 - C5 -2I6U 4.1 OTC_MYCTU
87 PsiBlast_CBE 68.8933% -68 - C5 -2I6U 4.6 OTC_MYCTU
88 PsiBlast_CBE 68.3233% -69 - C5 -2I6U 4.1 OTC_MYCTU