@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1652: (2016-03-27 )
MVHNKNNTILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLFDITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDVPYVLDTIKLLTEEKLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKHDVPVILFGVGASHLINEWNDLPIDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILLAPWNVIEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHTYTQR

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CP3_A_2(2Q71)
DCUP_HUMAN
[Raw transfer]



1CP_A_2(1R3Q)
DCUP_HUMAN
[Raw transfer]



CP3_A_2(1R3Y)
DCUP_HUMAN
[Raw transfer]



1CP_A_2(1R3S)
DCUP_HUMAN
[Raw transfer]



CP3_A_2(1R3W)
DCUP_HUMAN
[Raw transfer]



1CP_A_2(1R3S)
DCUP_HUMAN
[Raw transfer]



1CP_A_2(1R3V)
DCUP_HUMAN
[Raw transfer]



CP3_A_2(1R3T)
DCUP_HUMAN
[Raw transfer]



EDO_B_10(4ZR8)
?
[Raw transfer]



EDO_A_5(4ZR8)
?
[Raw transfer]
1 PsiBlast_PDB 98.5069%-117 - C3 -2INF - DCUP_BACSU -
26 HHSearch 97.5369%-114 - C3 -2INF - DCUP_BACSU -
9 PsiBlast_PDB 87.0636%-101 - C3 -1URO - DCUP_HUMAN -
14 PsiBlast_PDB 86.8836%-100 - C3 -3GW3 - DCUP_HUMAN -
11 PsiBlast_PDB 86.6136%-104 - C3 -1R3Y 10.4 DCUP_HUMAN
10 PsiBlast_PDB 86.5436%-103 - C3 -1R3Q 9.9 DCUP_HUMAN
12 PsiBlast_PDB 86.5036%-101 - C3 -3GVQ - DCUP_HUMAN -
8 PsiBlast_PDB 86.4736%-102 - C3 -3GW0 - DCUP_HUMAN -
15 PsiBlast_PDB 86.0336%-100 - C3 -1JPH - DCUP_HUMAN -
17 PsiBlast_PDB 86.0035%-103 - C3 -3GVV - DCUP_HUMAN -
13 PsiBlast_PDB 85.9136%-101 - C3 -3GVR - DCUP_HUMAN -
24 PsiBlast_CBE 85.8035%-104 - C3 -1R3S 10.5 DCUP_HUMAN
19 PsiBlast_PDB 85.7835%-102 - C3 -1R3V 7.6 DCUP_HUMAN
16 PsiBlast_PDB 85.6835%-101 - C3 -1R3W 10.2 DCUP_HUMAN
23 PsiBlast_CBE 85.5635%-102 - C3 -1R3T 8.4 DCUP_HUMAN
48 Fugue 85.5435% -98 - C3 -1URO - DCUP_HUMAN -
4 PsiBlast_PDB 85.4638%-107 - C3 -2EJA - DCUP_AQUAE -
18 PsiBlast_PDB 85.3835%-100 - C3 -3GVW - DCUP_HUMAN -
2 PsiBlast_PDB 85.3437%-103 - C3 -4ZR8 2.9 ?
25 PsiBlast_CBE 85.2435%-104 - C3 -2Q71 11.3 DCUP_HUMAN
21 PsiBlast_CBE 84.7737%-100 - C3 -4ZR8 2.0 ?
27 HHSearch 82.7534% -97 - C3 -1R3S 10.4 DCUP_HUMAN