@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2020: (2016-03-31 )
MTIRFDNVSYTYQKGTPYQHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFEDTVEREMIFGPKNFKMNLDEAKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVVDEPTAGLDPQSKRQVMRLLKSLQTDENKAIILISHDMNEVARYADEVIVMKEGSIVSQTSPKELFKDKKKLADWHIGLPEIVQLQYDFEQKYQTKLKDIALTEEAFVSLYKEWQHEK

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ANP_A_6(4ZIR)
ECFA2_THEMA
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]
1 PsiBlast_PDB 94.0845%-100 - C1 -4HUQ - ECFA2_LACBA -
2 PsiBlast_PDB 91.9045% -93 - C1 -4HZU - ECFA2_LACBA -
3 PsiBlast_PDB 86.8739% -91 - C1 -4MKI - ECFA2_CALS4 -
21 PsiBlast_CBE 85.9339% -92 - C1 -4MKI - ECFA2_CALS4 -
4 PsiBlast_PDB 75.4935%-101 - C1 -3GFO - ECFA3_CLOP1 -
73 Fugue 75.1029% -91 - C1 -3TUZ - METN_ECOLI -
61 HHSearch 74.4135%-101 - C1 -3GFO - ECFA3_CLOP1 -
10 PsiBlast_PDB 73.8930% -89 - C1 -3TUZ - METN_ECOLI -
71 HHSearch 70.7134% -94 - C1 -2YZ2 - ECFA2_THEMA -
9 PsiBlast_PDB 70.1130% -86 - C1 -3TUI - METN_ECOLI -
15 PsiBlast_PDB 70.0735%-112 - C1 -4YMU 4.8 ?
26 PsiBlast_CBE 68.7035%-110 - C1 -4YMU 4.3 ?
8 PsiBlast_PDB 68.5531% -84 - C1 -3DHW - METN_ECOLI -
23 PsiBlast_CBE 68.2634%-108 - C1 -1L2T - Y796_METJA -
24 PsiBlast_CBE 68.2034%-108 - C1 -3TIF 3.1 Y796_METJA
17 PsiBlast_PDB 67.8735%-111 - C1 -4YMW - ? -
12 PsiBlast_PDB 67.5734%-102 - C1 -3TIF - Y796_METJA -
41 PsiBlast_CBE 67.4931%-103 - C1 -2OUK - ? -
13 PsiBlast_PDB 67.4635%-113 - C1 -4YMS - ? -
44 PsiBlast_CBE 67.2431%-107 - C1 -2OLK - ? -
25 PsiBlast_CBE 67.2335%-109 - C1 -4YMV 3.5 ?
16 PsiBlast_PDB 66.8135%-111 - C1 -4YMV 3.6 ?
20 PsiBlast_PDB 64.6132% -88 - C1 -4U00 4.4 ?
32 PsiBlast_CBE 63.8131%-106 - C1 -3C41 3.5 ?
33 PsiBlast_CBE 62.7131%-102 - C1 -3C41 4.8 ?
6 PsiBlast_PDB 55.4136% -85 - C1 -4ZIR 5.9 ECFA2_THEMA