@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2200: (2016-04-02 )
MIQLNNIHKSFNDVEVIKGIDLSVEQGEVVTLIGRSGSGKTTLLRMINALEIPTEGTVYVNGKTYTSKDKKSQIEVRKQSGMVFQSYNLFPHKTALENVMEGLITVKKLKKDEARGKSLELLEKVGLTHVKDQRPHALSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVNDVLKVIKDLANEGMTMVIVTHEMRFAKEVSNNIVFIHEGMIGEQGAPEEMFNRPKTEELRRFLNVINEE

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_6(4YMV)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




ATP_H_8(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGK)
HLYBP_ECOLX
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ATP_G_7(2FGJ)

[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ATP_G_7(2FGK)

[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




21 PsiBlast_CBE 96.3957%-102 - C1 -4YMV 6.3 ?
2 PsiBlast_PDB 95.4557%-103 - C1 -4YMT - ? -
22 PsiBlast_CBE 94.7557%-103 - C1 -4YMU 6.2 ?
3 PsiBlast_PDB 94.3857%-100 - C1 -4YMU 6.4 ?
5 PsiBlast_PDB 94.3457%-104 - C1 -4YMW - ? -
4 PsiBlast_PDB 94.2457%-102 - C1 -4YMV 5.2 ?
1 PsiBlast_PDB 93.4357%-104 - C1 -4YMS - ? -
34 PsiBlast_CBE 92.8252% -98 - C1 -2OLK 6.1 ?
11 PsiBlast_PDB 92.5152%-104 - C1 -2OUK - ? -
32 PsiBlast_CBE 92.1952%-100 - C1 -2OLK 6.0 ?
14 PsiBlast_PDB 91.9150%-100 - C1 -1B0U - HISP_SALTY -
114 HHSearch 91.6950%-101 - C1 -1B0U - HISP_SALTY -
12 PsiBlast_PDB 91.4752% -99 - C1 -2Q0H 5.7 ?
6 PsiBlast_PDB 91.2955% -99 - C1 -4U00 5.9 ?
27 PsiBlast_CBE 91.1552%-102 - C1 -3C4J 4.9 ?
7 PsiBlast_PDB 90.8955% -95 - C1 -4U02 - ? -
28 PsiBlast_CBE 90.7852% -97 - C1 -2Q0H 5.9 ?
10 PsiBlast_PDB 90.6752% -97 - C1 -2OLK 5.9 ?
113 HHSearch 90.6353%-105 - C1 -2OLJ - ? -
13 PsiBlast_PDB 90.4752% -98 - C1 -3C4J 6.7 ?
9 PsiBlast_PDB 90.4652%-103 - C1 -2OLJ 5.7 ?
33 PsiBlast_CBE 90.2852% -97 - C1 -2OLK 6.0 ?
8 PsiBlast_PDB 89.3252% -97 - C1 -3C41 6.3 ?
26 PsiBlast_CBE 89.2552% -95 - C1 -3C41 6.2 ?
35 PsiBlast_CBE 89.0952% -94 - C1 -2OLJ 5.8 ?
73 PsiBlast_CBE 71.9138%-106 - C1 -3TIF 4.0 Y796_METJA
45 PsiBlast_CBE 71.8639%-104 - C1 -1L2T 4.8 Y796_METJA
72 PsiBlast_CBE 71.7238%-108 - C1 -3TIF 4.1 Y796_METJA
46 PsiBlast_CBE 71.6539%-103 - C1 -1L2T 4.5 Y796_METJA
90 PsiBlast_CBE 70.1935% -89 - C1 -3FVQ 4.7 FBPC_NEIG1
91 PsiBlast_CBE 68.1935% -87 - C1 -3FVQ 3.3 FBPC_NEIG1
109 HHSearch 66.5734% -88 - C1 -3FVQ 3.3 FBPC_NEIG1
76 PsiBlast_CBE 65.8335% -91 - C1 -1VCI 4.4 ?
85 PsiBlast_CBE 58.9837% -92 - C1 -4MKI 1.9 ECFA2_CALS4
86 PsiBlast_CBE 57.6537% -93 - C1 -4MKI 1.6 ECFA2_CALS4
95 PsiBlast_CBE 57.0134% -76 - C1 -2FGK 3.9
97 PsiBlast_CBE 56.7834% -75 - C1 -2FGK 3.9 HLYBP_ECOLX
98 PsiBlast_CBE 55.9334% -79 - C1 -2FGK 5.9 HLYBP_ECOLX
96 PsiBlast_CBE 55.4334% -77 - C1 -2FGK 3.9 HLYBP_ECOLX
101 PsiBlast_CBE 52.0334% -75 - C1 -2FGJ 5.2
102 PsiBlast_CBE 50.7434% -83 - C1 -2FGJ 3.1 HLYBP_ECOLX