@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2252: (2016-04-02 )
MTLLTVKHLTITDTWTDQPLVSDVNFTLTKGETLGVIGESGSGKSITCKSIIGLNPERLGVTGEIIFDGTSMLSLSESQRKKYRGKDIAMVMQQGSRAFDPSTTVGKQMFETMKVHTSMSTQEIEKTLIEYMDYLSLKDPKRILKSYPYMLSGGMLQRLMIALALALKPKLIIADEPTTALDTITQYDVLEAFIDIKKHFDCAMIFISHDLTVINKIADRVVVMKNGQLIEHGTRESVLHHPEHVYTKYLLSTKKKINDHFKHVMRGDVHD

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
49 Fugue 93.6928%-108 - C1 -3TUZ - METN_ECOLI -
5 PsiBlast_PDB 88.7631% -93 - C1 -4U00 3.7 ?
52 Fugue 88.7027%-105 - C1 -1OXS - ? -
9 PsiBlast_PDB 88.5733% -95 - C1 -2OLK 3.1 ?
27 PsiBlast_CBE 88.4531% -90 - C1 -4U02 - ? -
29 PsiBlast_CBE 88.4031% -90 - C1 -4U02 - ? -
35 PsiBlast_CBE 88.1733% -87 - C1 -2OUK - ? -
37 PsiBlast_CBE 88.1633% -93 - C1 -2OLK 2.8 ?
6 PsiBlast_PDB 87.9031% -91 - C1 -4U02 - ? -
28 PsiBlast_CBE 87.8431% -95 - C1 -4U02 - ? -
13 PsiBlast_PDB 87.2626%-120 - C1 -2IT1 - ? -
31 PsiBlast_CBE 87.2433% -96 - C1 -3C4J 4.0 ?
11 PsiBlast_PDB 86.9333% -88 - C1 -2Q0H 2.8 ?
61 HHSearch 86.6631%-111 - C1 -3TUI - METN_ECOLI -
8 PsiBlast_PDB 86.1433% -92 - C1 -2OLJ 3.8 ?
10 PsiBlast_PDB 86.0033% -92 - C1 -2OUK - ? -
62 HHSearch 85.9628%-117 - C1 -1V43 - ? -
7 PsiBlast_PDB 85.8433% -90 - C1 -3C41 3.6 ?
12 PsiBlast_PDB 85.8333% -86 - C1 -3C4J 3.8 ?
30 PsiBlast_CBE 85.8133% -92 - C1 -3C41 3.1 ?
36 PsiBlast_CBE 85.0733% -91 - C1 -2OLK 4.0 ?
39 PsiBlast_CBE 84.7833% -90 - C1 -2OLJ 3.0 ?
38 PsiBlast_CBE 84.2833% -91 - C1 -2OLK 2.8 ?
32 PsiBlast_CBE 84.0333% -87 - C1 -2Q0H 3.6 ?
17 PsiBlast_PDB 81.4831% -88 - C1 -4YMV 4.9 ?
16 PsiBlast_PDB 80.6331% -86 - C1 -4YMU 4.7 ?
41 PsiBlast_CBE 80.5831% -85 - C1 -4YMU 4.4 ?
40 PsiBlast_CBE 80.0031% -85 - C1 -4YMV 4.4 ?