@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2494: (2016-04-04 )
MNNGTVKWFNAEKGFGFIEQENGGDVFVHFSGIASDGYKTLEEGQKVTFEITEGQRGDQAVNVQTV

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_R_3(3PF4)
CSPB_BACSU
[Raw transfer]
-
TRS_A_7(1C9O)
CSPB_BACCL
[Raw transfer]



TRS_A_7(1C9O)
CSPB_BACCL
[Raw transfer]



TRS_B_6(1C9O)
CSPB_BACCL
[Raw transfer]



CHAIN_S_4(3PF5)
CSPB_BACSU
[Raw transfer]
-
CHAIN_R_3(3PF4)
CSPB_BACSU
[Raw transfer]
-
CHAIN_R_3(3PF5)
CSPB_BACSU
[Raw transfer]
-
NACID_D_2(2HAX)
CSPB_BACCL
[Raw transfer]
-
NACID_B_1(2ES2)
CSPB_BACSU
[Raw transfer]
-
NACID_C_1(2HAX)
CSPB_BACCL
[Raw transfer]
-
20 PsiBlast_PDB 90.2160%-118 - C6 -1MJC - CSPA_ECOLI -
9 PsiBlast_PDB 88.5069%-104 - C6 -3PF5 2.8 CSPB_BACSU
1 PsiBlast_PDB 88.4571%-105 - C6 -2I5M - CSPB_BACSU -
4 PsiBlast_PDB 88.1369%-104 - C6 -1CSP - CSPB_BACSU -
5 PsiBlast_PDB 88.1169%-100 - C6 -1CSQ - CSPB_BACSU -
21 PsiBlast_CBE 88.0169%-105 - C6 -3PF5 6.9 CSPB_BACSU
62 HHSearch 87.5264%-103 - C6 -1C9O 2.1 CSPB_BACCL
22 PsiBlast_CBE 86.8069%-102 - C6 -3PF4 7.2 CSPB_BACSU
17 PsiBlast_PDB 86.7570%-114 - C6 -2I5L - CSPB_BACSU -
8 PsiBlast_PDB 86.4469%-103 - C6 -3PF4 Error CSPB_BACSU
15 PsiBlast_PDB 85.2766%-109 - C6 -1I5F - CSPB_BACCL -
13 PsiBlast_PDB 85.0766%-108 - C6 -1HZA - CSPB_BACCL -
10 PsiBlast_PDB 84.9866%-112 - C6 -1C9O 2.1 CSPB_BACCL
16 PsiBlast_PDB 84.9166%-110 - C6 -1HZC - CSPB_BACCL -
65 HHSearch 83.9958% -98 - C6 -3A0J - ? -
19 PsiBlast_PDB 83.6760%-106 - C6 -2L15 - ? -
2 PsiBlast_PDB 83.4769%-105 - C6 -2ES2 9.6 CSPB_BACSU
12 PsiBlast_PDB 82.6566%-102 - C6 -1HZB - CSPB_BACCL -
24 PsiBlast_CBE 81.6566%-102 - C6 -1C9O 2.1 CSPB_BACCL
14 PsiBlast_PDB 81.4066%-104 - C6 -1HZ9 - CSPB_BACCL -
11 PsiBlast_PDB 69.1666%-105 - C6 -2HAX 12.7 CSPB_BACCL
23 PsiBlast_CBE 69.0166%-107 - C6 -2HAX 13.2 CSPB_BACCL