@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0122: (2015-12-12 )
MSNTTWSPTSWHSFKIEQHPTYKDEQELERVKKELRSYPPLVFAGEARNLQERLAQVIDNKAFLLQGGDCAESFSQFSANRIRDMFKVMMQMAIVLTFAGSIPIVKVGRIAGQFAKPRSNATEILDDEEVLSYRGDIINGISKKEREPKPERMLKAYHQSVATLNLIRAFAQGGLADLEQVHRFNLDFVKNNDFGQKYQQIADRITQALGFMRACGVEIERTPILREVEFYTSHEALLLHYEEPLVRKDSLTNQFYDCSAHMLWIGERTRDPKGAHVEFLRGVCNPIGVKIGPNASVSEVLELCDVLNPHNLKGRLNLIVRMGSKIIKERLPKLLQGVLKEKRHILWSIDPMHGNTVKTNLGVKTRAFDSVLDEVKSFFEIHRAEGSLASGVHLEMTGENVTECIGGSQAITEEGLSCHYYTQCDPRLNATQALELAFLIADMLKKQRT

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

035_A_4(3PFP)
AROG_MYCTU
[Raw transfer]



036_B_7(3PFP)
AROG_MYCTU
[Raw transfer]



PEP_A_7(3NV8)
AROG_MYCTU
[Raw transfer]



PEP_A_7(2B7O)
AROG_MYCTU
[Raw transfer]



GOL_B_17(2W19)
AROG_MYCTU
[Raw transfer]



GOL_B_13(2W1A)
AROG_MYCTU
[Raw transfer]



GOL_A_11(3RZI)
AROG_MYCTU
[Raw transfer]



G3P_A_5(1OF8)
AROG_YEAST
[Raw transfer]
18 PsiBlast_CBE 97.3347% -98 - C4 -2W19 3.9 AROG_MYCTU
1 PsiBlast_PDB 96.9347%-100 - C4 -2W19 - AROG_MYCTU -
27 PsiBlast_CBE 96.7947% -86 - C4 -3KGF - AROG_MYCTU -
20 PsiBlast_CBE 96.2847% -87 - C4 -2YPQ - AROG_MYCTU -
22 PsiBlast_CBE 96.2647% -86 - C4 -2YPO - AROG_MYCTU -
10 PsiBlast_PDB 96.1747% -85 - C4 -3PFP 7.3 AROG_MYCTU
23 PsiBlast_CBE 96.1247% -85 - C4 -3PFP 8.2 AROG_MYCTU
21 PsiBlast_CBE 96.1047% -86 - C4 -2YPP - AROG_MYCTU -
19 PsiBlast_CBE 96.0947% -86 - C4 -3RZI - AROG_MYCTU -
3 PsiBlast_PDB 95.8947% -85 - C4 -3RZI - AROG_MYCTU -
5 PsiBlast_PDB 95.6247% -85 - C4 -2YPP - AROG_MYCTU -
17 PsiBlast_CBE 95.3847% -86 - C4 -2W1A 2.0 AROG_MYCTU
24 PsiBlast_CBE 95.3647% -87 - C4 -3NV8 - AROG_MYCTU -
25 PsiBlast_CBE 95.3247% -92 - C4 -3NUE - AROG_MYCTU -
8 PsiBlast_PDB 95.2147% -91 - C4 -3NUD - AROG_MYCTU -
4 PsiBlast_PDB 95.1947% -84 - C4 -2YPO - AROG_MYCTU -
26 PsiBlast_CBE 95.1847% -87 - C4 -3NUD - AROG_MYCTU -
9 PsiBlast_PDB 95.0747% -87 - C4 -3NV8 3.3 AROG_MYCTU
7 PsiBlast_PDB 95.0047% -86 - C4 -3KGF - AROG_MYCTU -
2 PsiBlast_PDB 94.8247% -86 - C4 -2W1A - AROG_MYCTU -
11 PsiBlast_PDB 94.5145% -91 - C4 -2B7O 3.8 AROG_MYCTU
28 HHSearch 93.2644% -76 * C4 *3RZI 3.1 AROG_MYCTU