@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0615: (2015-12-16 )
MPYSSKVQSLSESATIAISTLAKELKSQGKDILSFSAGEPDFDTPQAIKDAAIKALNDGFTKYTPVAGIPELLKAIAFKLKKENNLDYEPSEILVSNGAKQSLFNAIQALIGEGDEVVIPVPFWVTYPELVKYSGGVSQFIQTDEKSHFKITPKQLKDALSPKTKMLILTTPSNPTGMLYSKAELEALGEVLKDTKVWVLSDEIYEKLVYKGEFVSCAAVSEEMKKRTITINGLSKSVAMTGWRMGYAASKDKKLVKLMSNLQSQCTSNINSITQMASIVALEGLVDKEIETMRQAFEKRCHLAHAKINAIEGLNALKPDGAFYLFINIGSLCGGDSMRFCHELLEKEGVALVPGKAFGLEGYVRLSFACSEEQIEKGIERIARFVKSKG

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ASP_D_4(1GCK)
AAT_THET8
[Raw transfer]



PLP_E_5(1GDE)
?
[Raw transfer]



GLU_D_4(1GDE)
?
[Raw transfer]



PLP_F_6(1GDE)
?
[Raw transfer]



GOL_A_8(3E2Y)
KAT3_MOUSE
[Raw transfer]



PLP_A_12(1O4S)
AAT_THEMA
[Raw transfer]



PLP_A_12(1O4S)
AAT_THEMA
[Raw transfer]



PLP_B_13(1O4S)
AAT_THEMA
[Raw transfer]



PLP_F_6(1GCK)
AAT_THET8
[Raw transfer]



GLU_C_3(1GDE)
?
[Raw transfer]



PLP_B_4(1GD9)
?
[Raw transfer]



PLP_A_3(1GD9)
?
[Raw transfer]



PLP_A_3(1GD9)
?
[Raw transfer]



PLP_E_5(1GCK)
AAT_THET8
[Raw transfer]



PLP_A_5(1B5O)
AAT_THET8
[Raw transfer]



PLP_B_6(1B5P)
AAT_THET8
[Raw transfer]



PLP_A_5(1B5P)
AAT_THET8
[Raw transfer]



PLP_A_5(1B5P)
AAT_THET8
[Raw transfer]



PLP_A_3(1J32)
?
[Raw transfer]



ASP_C_3(1GCK)
AAT_THET8
[Raw transfer]



PLP_B_4(1J32)
?
[Raw transfer]



PLP_A_5(5BJ4)
AAT_THET8
[Raw transfer]



PLP_B_6(5BJ4)
AAT_THET8
[Raw transfer]



PLP_B_6(1B5O)
AAT_THET8
[Raw transfer]



PLP_A_3(1DJU)
?
[Raw transfer]
21 PsiBlast_CBE 93.3344% -98 - C1 -1J32 5.4 ?
4 PsiBlast_PDB 92.2343%-101 - C1 -1BJW - AAT_THET8 -
55 HHSearch 92.1345% -93 - C1 -1J32 4.7 ?
56 HHSearch 91.0242% -96 * C1 *1B5P 4.7 AAT_THET8
1 PsiBlast_PDB 90.7344% -97 - C1 -1J32 - ? -
31 PsiBlast_CBE 90.5342% -99 - C1 -1GC4 - AAT_THET8 -
29 PsiBlast_CBE 90.2942% -98 - C1 -1GC4 - AAT_THET8 -
25 PsiBlast_CBE 90.2543% -99 - C1 -1B5O 5.2 AAT_THET8
48 Fugue 90.2342%-105 - C1 -1BJW - AAT_THET8 -
22 PsiBlast_CBE 90.1943% -94 - C1 -1BKG - AAT_THET8 -
8 PsiBlast_PDB 90.1542% -98 - C1 -1GC4 - AAT_THET8 -
27 PsiBlast_CBE 90.0742% -98 - C1 -1B5P 4.6 AAT_THET8
23 PsiBlast_CBE 89.9443% -95 - C1 -1BKG - AAT_THET8 -
30 PsiBlast_CBE 89.7342% -98 - C1 -1GC4 - AAT_THET8 -
3 PsiBlast_PDB 89.5843% -97 - C1 -1B5O 4.8 AAT_THET8
24 PsiBlast_CBE 89.4743% -94 - C1 -1BKG - AAT_THET8 -
2 PsiBlast_PDB 89.4143% -94 - C1 -1BKG - AAT_THET8 -
6 PsiBlast_PDB 88.4142% -98 - C1 -1B5P 4.7 AAT_THET8
34 PsiBlast_CBE 88.3642%-105 - C1 -1GC3 - AAT_THET8 -
42 PsiBlast_CBE 88.1639%-101 - C1 -1O4S 4.4 AAT_THEMA
26 PsiBlast_CBE 87.5242% -94 - C1 -1GCK 6.6 AAT_THET8
11 PsiBlast_PDB 87.1039%-100 - C1 -1O4S 4.7 AAT_THEMA
5 PsiBlast_PDB 86.6742% -98 - C1 -1GCK 5.6 AAT_THET8
28 PsiBlast_CBE 86.4042% -98 - C1 -5BJ4 5.0 AAT_THET8
9 PsiBlast_PDB 83.9042% -98 - C1 -5BJ4 5.0 AAT_THET8
58 HHSearch 83.0238% -95 - C1 -1O4S 4.7 AAT_THEMA
57 HHSearch 78.8838% -92 - C1 -1GD9 3.7 ?
12 PsiBlast_PDB 73.5938% -95 - C1 -1DJU 3.5 ?
43 PsiBlast_CBE 72.6537% -91 - C1 -1GDE 4.2 ?
13 PsiBlast_PDB 72.3037% -91 - C1 -1GDE 4.0 ?
44 PsiBlast_CBE 71.6437% -92 - C1 -1GD9 3.8 ?
14 PsiBlast_PDB 70.6837% -93 - C1 -1GD9 3.7 ?
70 HHSearch 65.4430% -93 - C1 -3E2Y 3.9 KAT3_MOUSE