@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0679: (2015-12-17 )
MKARGFKTKMRGFKIFSGSAHPAFGKEVSKHLGFPLSKAVIGKFSDGEINIQISESVRGKDIFIIQPTCVPVNDNLMELLVMVDALRRSSANSITAVLPYFGYARQDRKAAPRVPITAKMVANLMQEVGIERIITMDLHAGQIQGFFDVPVDNLYGSIVFRDYIRSKALKNPIIASPDVGGVTRARYFANQMGLDLIIVDKRREKANESEVMNIIGSAKERDVILVDDMIDTAGTICKAALALKEQGATSVMALGTHAVLSGNAIKRIKESALDEVVVTNSIPLVQKCDKITTLSVASLFAEVIRRIYHNESVQSLFT

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMP_B_13(3DAH)
?
[Raw transfer]



ABM_F_6(1DKU)
KPRS_BACSU
[Raw transfer]



AMP_B_12(2HCR)
PRPS1_HUMAN
[Raw transfer]



AMP_B_12(3DAH)
?
[Raw transfer]



AMP_A_11(2HCR)
PRPS1_HUMAN
[Raw transfer]



AMP_A_11(3DAH)
?
[Raw transfer]



ABM_E_5(1DKU)
KPRS_BACSU
[Raw transfer]



ABM_E_5(1DKU)
KPRS_BACSU
[Raw transfer]



R5P_E_5(1U9Z)
KPRS_METJA
[Raw transfer]
103 HHSearch 96.8057%-150 - C10 -3DAH 3.0 ?
21 PsiBlast_CBE 96.7557%-148 - C10 -3DAH 3.2 ?
1 PsiBlast_PDB 96.4157%-149 - C10 -3DAH - ? -
92 Fugue 95.6552%-143 - C10 -1DKU 2.9 KPRS_BACSU
23 PsiBlast_CBE 95.4751%-147 - C10 -1DKU 4.0 KPRS_BACSU
104 HHSearch 95.3551%-145 - C10 -1DKU 2.9 KPRS_BACSU
22 PsiBlast_CBE 95.3257%-148 - C10 -3DAH 3.7 ?
2 PsiBlast_PDB 94.9951%-145 - C10 -1DKU - KPRS_BACSU -
24 PsiBlast_CBE 94.8051%-150 - C10 -1DKR - KPRS_BACSU -
102 HHSearch 93.0949%-145 * C10 *3S5J - PRPS1_HUMAN -
7 PsiBlast_PDB 92.7748%-143 - C10 -3S5J - PRPS1_HUMAN -
28 PsiBlast_CBE 92.5848%-143 - C10 -2HCR 3.4 PRPS1_HUMAN
25 PsiBlast_CBE 92.4548%-144 - C10 -2H07 - PRPS1_HUMAN -
31 PsiBlast_CBE 92.4148%-142 - C10 -4LYG - PRPS1_HUMAN -
11 PsiBlast_PDB 92.2647%-142 - C10 -4LZN - PRPS1_HUMAN -
6 PsiBlast_PDB 92.2548%-145 - C10 -3EFH - PRPS1_HUMAN -
34 PsiBlast_CBE 91.9747%-141 - C10 -4F8E - PRPS1_HUMAN -
29 PsiBlast_CBE 91.9348%-142 - C10 -2H06 - PRPS1_HUMAN -
5 PsiBlast_PDB 91.7448%-142 - C10 -2HCR 4.3 PRPS1_HUMAN
12 PsiBlast_PDB 91.4247%-140 - C10 -4F8E - PRPS1_HUMAN -
18 PsiBlast_PDB 77.3330%-148 - C10 -1U9Z 3.0 KPRS_METJA