@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0730: (2015-12-17 )
MGYIPYVIENTERGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MPD_Z_(3MT6)
CLPP_ECOLI
[Raw transfer]




43 PsiBlast_CBE 98.3098%-129 - C7 -2ZL4 - CLPP_HELPY -
41 PsiBlast_CBE 94.7598%-132 - C7 -2ZL4 - CLPP_HELPY -
30 PsiBlast_CBE 94.0899%-131 - C7 -2ZL2 - CLPP_HELPY -
29 PsiBlast_CBE 93.9899%-136 - C7 -2ZL2 - CLPP_HELPY -
42 PsiBlast_CBE 93.9498%-131 - C7 -2ZL4 - CLPP_HELPY -
34 PsiBlast_CBE 93.8898%-129 - C7 -2ZL4 - CLPP_HELPY -
35 PsiBlast_CBE 93.5898%-129 - C7 -2ZL4 - CLPP_HELPY -
36 PsiBlast_CBE 93.4998%-131 - C7 -2ZL4 - CLPP_HELPY -
2 PsiBlast_PDB 93.3399%-130 - C7 -2ZL2 - CLPP_HELPY -
1 PsiBlast_PDB 93.2099%-132 - C7 -2ZL0 - CLPP_HELPY -
4 PsiBlast_PDB 93.1998%-134 - C7 -2ZL4 - CLPP_HELPY -
39 PsiBlast_CBE 93.1798%-131 - C7 -2ZL4 - CLPP_HELPY -
27 PsiBlast_CBE 93.1699%-131 - C7 -2ZL2 - CLPP_HELPY -
40 PsiBlast_CBE 92.9598%-128 - C7 -2ZL4 - CLPP_HELPY -
32 PsiBlast_CBE 92.9598%-132 - C7 -2ZL4 - CLPP_HELPY -
25 PsiBlast_CBE 92.9299%-133 - C7 -2ZL2 - CLPP_HELPY -
24 PsiBlast_CBE 92.8799%-128 - C7 -2ZL2 - CLPP_HELPY -
22 PsiBlast_CBE 92.8699%-129 - C7 -2ZL2 - CLPP_HELPY -
3 PsiBlast_PDB 92.7598%-131 - C7 -2ZL3 - CLPP_HELPY -
28 PsiBlast_CBE 92.6699%-129 - C7 -2ZL2 - CLPP_HELPY -
46 PsiBlast_CBE 86.7670%-129 - C7 -3MT6 3.6 CLPP_ECOLI