@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0968: (2015-12-19 )
MISKFLLKSMFKQWKNGDYQVVFWDNSVYRNGEHSPKFTLKIHRPLKFSDIKKDMSLTIAEAYMDGVIDIEGSMDEVMHSLYLQTNYEHLHKHDSAKAVQKPLKESSNISKHYDLGNDFYSIWLDETLSYSCAYFKKDDDTLHAAQLQKLDHTLKKLHLKQGEKLLDIGCGWGYLSIKAAQEYGAEVMGITISSEQYKQANKRVQELGLEDKVTIKLLNYQDLDGRLYRFDKVVSVGMFEHVGKDNLPFYFKKVKEVLKRGGMFLLHSILCCFEGKTNAWVDKYIFPGGYLPSLREVMSVMSECDFHLLMAESLRIHYAKTLDIWRDNFNHNLDQVKRLGYDERFIRMWDLYLRTCASAFRVGSADLFQLLLTNSVDNTFPLTKEYIYQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_K_11(1KPH)
CMAS1_MYCTU
[Raw transfer]




SAH_F_6(1L1E)
CMAS3_MYCTU
[Raw transfer]




SAH_J_10(1KPH)
CMAS1_MYCTU
[Raw transfer]




SAH_L_12(1KPH)
CMAS1_MYCTU
[Raw transfer]




SAH_A_9(1KPG)
CMAS1_MYCTU
[Raw transfer]




SAH_I_9(1KPH)
CMAS1_MYCTU
[Raw transfer]




SAH_C_3(1TPY)
MMAA2_MYCTU
[Raw transfer]




SAH_A_9(1KPG)
CMAS1_MYCTU
[Raw transfer]




SAM_B_2(2FK8)
MMAA4_MYCTU
[Raw transfer]




SAH_G_7(1KPI)
CMAS2_MYCTU
[Raw transfer]




SAH_I_9(1KPH)
CMAS1_MYCTU
[Raw transfer]




SAH_E_5(1L1E)
CMAS3_MYCTU
[Raw transfer]




SAH_I_9(1KPH)
CMAS1_MYCTU
[Raw transfer]




10A_P_16(1KPH)
CMAS1_MYCTU
[Raw transfer]




16A_A_13(1KPG)
CMAS1_MYCTU
[Raw transfer]




16A_D_4(1TPY)
MMAA2_MYCTU
[Raw transfer]




D22_A_2(3HEM)
CMAS2_MYCTU
[Raw transfer]




D22_A_2(3HEM)
CMAS2_MYCTU
[Raw transfer]




10A_H_8(1KPI)
CMAS2_MYCTU
[Raw transfer]




ACY_D_4(1KP9)
CMAS1_MYCTU
[Raw transfer]




ACY_C_3(1KP9)
CMAS1_MYCTU
[Raw transfer]




80 HHSearch 83.9836% -92 - C2 -1KPG 6.3 CMAS1_MYCTU
5 PsiBlast_PDB 82.8633% -97 - C2 -1TPY 7.0 MMAA2_MYCTU
21 PsiBlast_CBE 82.6735%-103 - C2 -1L1E 6.2 CMAS3_MYCTU
22 PsiBlast_CBE 82.5234% -99 - C2 -1KPH 7.6 CMAS1_MYCTU
23 PsiBlast_CBE 82.2534% -98 - C2 -1KPH 7.5 CMAS1_MYCTU
1 PsiBlast_PDB 81.9834% -95 - C2 -1KPG 6.6 CMAS1_MYCTU
24 PsiBlast_CBE 81.2534% -96 - C2 -1KPH 6.6 CMAS1_MYCTU
11 PsiBlast_PDB 81.2431% -91 * C2 *1KPI 7.6 CMAS2_MYCTU
2 PsiBlast_PDB 81.0535%-104 - C2 -1L1E 5.7 CMAS3_MYCTU
4 PsiBlast_PDB 81.0034% -97 - C2 -1KPH 7.1 CMAS1_MYCTU
79 HHSearch 80.4532% -84 - C2 -3HEM 5.8 CMAS2_MYCTU
69 Fugue 80.0535% -95 - C2 -1KPH 7.0 CMAS1_MYCTU
12 PsiBlast_PDB 79.9931% -88 - C2 -3HEM 5.9 CMAS2_MYCTU
78 HHSearch 79.6831% -97 - C2 -2FK8 7.9 MMAA4_MYCTU
25 PsiBlast_CBE 79.5134% -95 - C2 -1KP9 4.0 CMAS1_MYCTU
70 Fugue 78.7735% -92 - C2 -1KPH 7.1 CMAS1_MYCTU
3 PsiBlast_PDB 78.7234% -94 - C2 -1KP9 3.9 CMAS1_MYCTU
6 PsiBlast_PDB 74.8231% -89 - C2 -2FK7 - MMAA4_MYCTU -
9 PsiBlast_PDB 74.2031% -91 - C2 -3HA5 - MMAA4_MYCTU -
8 PsiBlast_PDB 74.0331% -88 - C2 -3HA3 - MMAA4_MYCTU -