@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1420: (2015-12-23 )
MCGIVGYIGDSEKKSILLEGLKELEYRGYDSAGLAVLSANRLEVFKTQGKLENLRTELKNKEFLNFGVSIAHTRWATHGKPSSANAHPHFTENLALVHNGIIENYASLKKELENKGHAFLSQTDTEVIAHLLEETLKSEGDLLKAFEKSISLLKGSYAILMLHKRAKESLFYAKSSSPLIVGKGKEGVFFASSLSVLAPKVDQFVILEENSVGQISLENFKDLNNIENMKDYAFENKDYSKGNFRNYLEKEIYEQHSSLLECLEGRLEALSVYCEIDPEFLENVSEITLCSCGSSYHASLASVYLFERLAKIRARAILASEYRYAHFKSNPNELFIAISQSGETADTLEALKLAKAQGLKTISLCNAPFSMMSRISDHTLLIRAGVERSVASTKAFSSQVMLLWLLSVYLGKQLGTISKEEERIQAKNMLNSVKAMKVEPKLHEKIKRLSKRYLHGHGFFYIGRDVFYPLALEGALKLKEISYLHAEGYASAEMKHGPIALVDSNLFTIALLSKHLLFDKTKSNIEELSARDSTICVLSSEILEIADDFIQLEESESYMEEFFRMNLAMQLLALEIAMRLNHDVDHPRNLAKSVTVE

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GLP_X_2(2VF5)
GLMS_ECOLI
[Raw transfer]



G6P_A_2(1MOR)
GLMS_ECOLI
[Raw transfer]



GLP_A_2(1MOQ)
GLMS_ECOLI
[Raw transfer]



GLP_A_2(1MOQ)
GLMS_ECOLI
[Raw transfer]



AGP_A_6(1MOS)
GLMS_ECOLI
[Raw transfer]



G6Q_B_4(2J6H)
GLMS_ECOLI
[Raw transfer]



AGP_A_2(2ZJ4)
GFPT1_HUMAN
[Raw transfer]



G6P_A_2(2ZJ3)
GFPT1_HUMAN
[Raw transfer]



G6P_A_2(2ZJ3)
GFPT1_HUMAN
[Raw transfer]



G6Q_A_3(2J6H)
GLMS_ECOLI
[Raw transfer]



BG6_B_4(2PUW)
GFA1_CANAL
[Raw transfer]



BG6_A_3(2PUW)
GFA1_CANAL
[Raw transfer]
1 PsiBlast_PDB 96.0941% -87 - C2 -4AMV - GLMS_ECOLI -
27 PsiBlast_CBE 95.4641% -87 - C3 -3OOJ - GLMS_ECOLI -
3 PsiBlast_PDB 95.4541% -85 - C2 -2J6H 3.8 GLMS_ECOLI
25 PsiBlast_CBE 95.4241% -85 - C2 -2J6H 4.4 GLMS_ECOLI
21 PsiBlast_CBE 95.1841% -89 - C2 -4AMV - GLMS_ECOLI -
30 PsiBlast_CBE 94.8241% -86 - C3 -3OOJ - GLMS_ECOLI -
22 PsiBlast_CBE 94.6841% -87 - C2 -4AMV - GLMS_ECOLI -
32 PsiBlast_CBE 94.5341% -85 - C3 -3OOJ - GLMS_ECOLI -
6 PsiBlast_PDB 94.5341% -80 - C2 -3OOJ - GLMS_ECOLI -
26 PsiBlast_CBE 94.5241% -81 - C2 -3OOJ - GLMS_ECOLI -
28 PsiBlast_CBE 94.4841% -90 - C3 -3OOJ - GLMS_ECOLI -
29 PsiBlast_CBE 93.8541% -83 - C2 -3OOJ - GLMS_ECOLI -
2 PsiBlast_PDB 93.6141% -78 - C2 -1JXA - GLMS_ECOLI -
31 PsiBlast_CBE 93.3741% -81 - C2 -3OOJ - GLMS_ECOLI -
24 PsiBlast_CBE 91.7941% -82 - C2 -1JXA - GLMS_ECOLI -
23 PsiBlast_CBE 90.4341% -83 - C2 -1JXA - GLMS_ECOLI -
5 PsiBlast_PDB 74.0041% -89 - C2 -2VF5 3.3 GLMS_ECOLI
8 PsiBlast_PDB 73.4440% -85 - C2 -1MOQ 4.7 GLMS_ECOLI
7 PsiBlast_PDB 73.0040% -84 - C2 -1MOS 4.9 GLMS_ECOLI
9 PsiBlast_PDB 72.9040% -84 - C2 -1MOR 4.5 GLMS_ECOLI
67 HHSearch 72.2839% -83 - C2 -1MOQ 4.7 GLMS_ECOLI
62 HHSearch 68.5332% -86 * C2 *2ZJ3 4.0 GFPT1_HUMAN
20 PsiBlast_PDB 68.3234%-101 - C2 -2PUW 2.9 GFA1_CANAL
15 PsiBlast_PDB 67.5232% -77 - C2 -2ZJ3 4.0 GFPT1_HUMAN
38 PsiBlast_CBE 67.3934% -96 - C2 -2PUW 3.0 GFA1_CANAL
16 PsiBlast_PDB 66.0332% -76 - C2 -2ZJ4 4.6 GFPT1_HUMAN