@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0199: (2016-03-13 )
MSNEYFDPKLKIFSLNSNRELAEEIAKEVGIELGKSSVTHFSDGEIQINIEESIRGCHVYVIQSTSNPVNQNLMELLIMIDALKRASAATINIVMPYYGYARQDRKARSREPITAKLVANLIETAGATRMITLDMHAPQIQGFFDIPIDHLNAVRLLSDYFSERHLGDDLVVVSPDHGGVTRARKMADRLKAPIAIIDKRRPRPNVAEVMNIVGNVEGKVCIIIDDIIDTAGTITLAAKALREAGATKVYACCSHPVLSGPAMKRIEESPIEKLVVTNSIALPEEKWIDKMEQLSVAALLGEAIVRVHENASVSSLFE

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMP_B_12(2HCR)
PRPS1_HUMAN
[Raw transfer]




AMP_A_11(2HCR)
PRPS1_HUMAN
[Raw transfer]




ABM_F_6(1DKU)
KPRS_BACSU
[Raw transfer]




AMP_B_13(3DAH)
?
[Raw transfer]




ADP_A_7(3LRT)
KPRS_THEVO
[Raw transfer]




APC_A_4(3LPN)
KPRS_THEVO
[Raw transfer]




AMP_A_11(3DAH)
?
[Raw transfer]




ABM_E_5(1DKU)
KPRS_BACSU
[Raw transfer]




ABM_E_5(1DKU)
KPRS_BACSU
[Raw transfer]




AMP_B_12(3DAH)
?
[Raw transfer]




67 Fugue 97.7776%-156 - C8 -1DKU 2.9 KPRS_BACSU
21 PsiBlast_CBE 97.5476%-159 - C8 -1DKU 3.2 KPRS_BACSU
1 PsiBlast_PDB 97.4476%-156 - C8 -1DKU - KPRS_BACSU -
48 HHSearch 96.8777%-154 - C8 -1DKU 2.9 KPRS_BACSU
22 PsiBlast_CBE 96.2676%-155 - C8 -1DKR - KPRS_BACSU -
23 PsiBlast_CBE 87.0954%-149 - C8 -3DAH 3.1 ?
49 HHSearch 86.4254%-142 - C8 -3DAH 3.0 ?
47 HHSearch 85.8346%-148 * C8 *3S5J - PRPS1_HUMAN -
24 PsiBlast_CBE 85.1054%-145 - C8 -3DAH 3.7 ?
5 PsiBlast_PDB 84.4946%-151 - C8 -4LYG - PRPS1_HUMAN -
9 PsiBlast_PDB 84.3446%-151 - C8 -3EFH - PRPS1_HUMAN -
27 PsiBlast_CBE 84.2846%-153 - C8 -4LYG - PRPS1_HUMAN -
8 PsiBlast_PDB 84.2146%-149 - C8 -2HCR 4.2 PRPS1_HUMAN
35 PsiBlast_CBE 84.2046%-153 - C8 -4M0P - PRPS1_HUMAN -
2 PsiBlast_PDB 84.1954%-144 - C8 -3DAH - ? -
10 PsiBlast_PDB 83.6446%-150 - C8 -3S5J - PRPS1_HUMAN -
28 PsiBlast_CBE 83.6146%-150 - C8 -4LZN - PRPS1_HUMAN -
26 PsiBlast_CBE 83.5646%-151 - C8 -4LZO - PRPS1_HUMAN -
11 PsiBlast_PDB 83.5446%-150 - C8 -2H08 - PRPS1_HUMAN -
6 PsiBlast_PDB 83.5246%-152 - C8 -4LZN - PRPS1_HUMAN -
31 PsiBlast_CBE 83.4046%-149 - C8 -2HCR 3.4 PRPS1_HUMAN