@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1360: (2016-03-23 )
MGEIIDGKKLAKEIQEKVTREVAELVKEGKQPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISFDKDVDGFHPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDRDENNKLCGDVDFDDVVQEAGFITPVPGGVGPMTITMLLANTLKAAKRIWKMN

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

9L9_A_6(4B4W)
?
[Raw transfer]



L34_B_9(4B4V)
?
[Raw transfer]



9L9_B_9(4B4W)
?
[Raw transfer]



9L9_B_7(4CJX)
?
[Raw transfer]



9L9_A_5(4CJX)
?
[Raw transfer]



L34_E_5(1DIB)
C1TC_HUMAN
[Raw transfer]



NAP_D_4(1DIB)
C1TC_HUMAN
[Raw transfer]



NDP_C_3(1A4I)
C1TC_HUMAN
[Raw transfer]



NDP_C_3(1A4I)
C1TC_HUMAN
[Raw transfer]



NAP_A_3(3NGL)
FOLD_THEAC
[Raw transfer]



NDP_D_4(1A4I)
C1TC_HUMAN
[Raw transfer]



NAP_A_4(1DIG)
C1TC_HUMAN
[Raw transfer]



L24_A_5(1DIA)
C1TC_HUMAN
[Raw transfer]



L37_A_6(1DIG)
C1TC_HUMAN
[Raw transfer]



NAP_A_3(1DIA)
C1TC_HUMAN
[Raw transfer]



NAP_C_4(3NGL)
FOLD_THEAC
[Raw transfer]



NAP_B_5(1DIG)
C1TC_HUMAN
[Raw transfer]



NAP_B_4(1DIA)
C1TC_HUMAN
[Raw transfer]



NAP_C_3(1DIB)
C1TC_HUMAN
[Raw transfer]



NAD_A_3(3P2O)
FOLD_CAMJE
[Raw transfer]



NAD_A_3(3P2O)
FOLD_CAMJE
[Raw transfer]



EDO_B_14(4B4U)
?
[Raw transfer]



EDO_A_7(4B4U)
?
[Raw transfer]



NAP_B_7(4B4W)
?
[Raw transfer]



NAP_A_3(4B4U)
?
[Raw transfer]



NAP_B_10(4B4U)
?
[Raw transfer]



NAP_A_3(4B4V)
?
[Raw transfer]



NAP_B_7(4B4V)
?
[Raw transfer]



NAP_A_3(4B4W)
?
[Raw transfer]



IMD_A_4(3L07)
FOLD_FRATT
[Raw transfer]



IMD_B_7(3L07)
FOLD_FRATT
[Raw transfer]



IMD_A_4(3L07)
FOLD_FRATT
[Raw transfer]
74 HHSearch 95.4050%-107 * C4 *3P2O 7.1 FOLD_CAMJE
1 PsiBlast_PDB 95.1849%-109 - C4 -3P2O 7.1 FOLD_CAMJE
5 PsiBlast_PDB 94.8548%-113 - C4 -4A26 - ? -
3 PsiBlast_PDB 94.6548%-107 - C4 -3L07 3.9 FOLD_FRATT
73 HHSearch 93.8248%-105 - C4 -3L07 3.9 FOLD_FRATT
21 PsiBlast_CBE 93.7148%-107 - C4 -3L07 3.7 FOLD_FRATT
30 PsiBlast_CBE 93.6445%-109 - C4 -4CJX 6.1 ?
22 PsiBlast_CBE 93.1548%-106 - C4 -4A26 - ? -
13 PsiBlast_PDB 93.0945%-108 - C4 -4CJX 6.4 ?
25 PsiBlast_CBE 92.5446%-103 - C4 -1DIB 8.6 C1TC_HUMAN
75 HHSearch 92.1648%-100 - C4 -1A4I 9.0 C1TC_HUMAN
24 PsiBlast_CBE 92.1646%-103 - C4 -1DIG 7.8 C1TC_HUMAN
29 PsiBlast_CBE 92.1446%-103 - C4 -4B4U 5.9 ?
11 PsiBlast_PDB 91.8746%-106 - C4 -4B4V 6.1 ?
10 PsiBlast_PDB 91.6346%-102 - C4 -4B4U 6.2 ?
2 PsiBlast_PDB 91.4349% -99 - C4 -1B0A - FOLD_ECOLI -
8 PsiBlast_PDB 91.3446%-102 - C4 -1DIB 8.0 C1TC_HUMAN
9 PsiBlast_PDB 91.3146%-106 - C4 -1DIG 8.9 C1TC_HUMAN
6 PsiBlast_PDB 91.3146%-102 - C4 -1A4I 9.0 C1TC_HUMAN
92 Fugue 91.2948% -95 - C4 -1B0A - FOLD_ECOLI -
7 PsiBlast_PDB 91.2746%-104 - C4 -1DIA 9.0 C1TC_HUMAN
12 PsiBlast_PDB 91.2346% -99 - C4 -4B4W 5.8 ?
28 PsiBlast_CBE 91.2146%-102 - C4 -4B4V 5.9 ?
26 PsiBlast_CBE 90.8946%-102 - C4 -1DIA 8.5 C1TC_HUMAN
27 PsiBlast_CBE 90.8446%-102 - C4 -4B4W 5.8 ?
23 PsiBlast_CBE 90.6346% -99 - C4 -1A4I 9.6 C1TC_HUMAN
31 PsiBlast_CBE 80.4534%-107 - C4 -3NGL 9.3 FOLD_THEAC
16 PsiBlast_PDB 80.4534%-103 - C4 -3NGL 9.1 FOLD_THEAC