@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1989: (2016-03-30 )
MGKTLFDKLWNRHVIYGKEGEPQLLYVDLHLIHEVTSPQAFEGLRLENRPLRRPDKTFATMDHNVPTEDIFNIQDLVAKKQIEALQTNCAEFGVTLADMGSDRQGIVHMVGPETGLTQPGKVIVCGDSHTATHGAFGAIGFGIGSSEVEHVFATQTIWQQKPKSMGIEINGKLPKGVYAKDIILHLIATYGVAFGTGYAVEYYGETIRNMSMEERMTICNMAIEGGAKMGMMAPDETTFEYVRGREYAPTDMDKAISDWKTLQTDSDAEYDLHIKMDASILEPYVTWGTNPEMGVPFSKAFPEIKDMNYERAYEYMGLKPGQTAEQIELGYVFIGSCTNARLSDLEEAARIVKGNKVKNNIRALVVPGSRQVRNAAESIGLDKIFIEAGFEWREPGCSMCLGMNPDQVPDGVHCASTSNRNFEGRQGKGARTHLVSPAMAAAAAINGHFIDIRKVAVISGGN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NIC_A_3(8ACN)
ACON_BOVIN
[Raw transfer]



MIC_A_3(1AMI)
ACON_BOVIN
[Raw transfer]



ICT_A_3(1B0J)
ACON_PIG
[Raw transfer]



ICT_A_4(1C97)
ACON_BOVIN
[Raw transfer]



NTC_A_3(1NIS)
ACON_BOVIN
[Raw transfer]



O_A_4(1C96)
ACON_BOVIN
[Raw transfer]



SF4_A_3(2B3X)
ACOC_HUMAN
[Raw transfer]



O_A_4(1B0K)
ACON_PIG
[Raw transfer]



SF4_A_3(1ACO)
?
[Raw transfer]
21 PsiBlast_CBE 96.9833% -72 - C4 -4NQY - LEUC_METJA -
2 PsiBlast_PDB 96.5233% -71 - C4 -4NQY - LEUC_METJA -
1 PsiBlast_PDB 95.6034% -66 - C4 -4KP2 - HACA_METJA -
3 PsiBlast_PDB 95.3734% -83 - C4 -4KP1 - LEUC_METJA -
33 HHSearch 91.0825% -60 * C4 *1C96 - ACON_BOVIN -
24 Fugue 90.9925% -71 - C4 -1C96 - ACON_BOVIN -
23 Fugue 90.5025% -68 - C4 -1ACO Error ?
35 HHSearch 88.2925% -69 - C4 -1L5J - ACNB_ECOLI -
25 Fugue 87.1723% -59 - C4 -1L5J - ACNB_ECOLI -
34 HHSearch 85.7923% -58 - C4 -2B3Y - ACOC_HUMAN -
20 PsiBlast_PDB 83.6625% -61 - C4 -2B3Y - ACOC_HUMAN -
19 PsiBlast_PDB 83.4825% -65 - C4 -2B3X 2.4 ACOC_HUMAN
4 PsiBlast_PDB 81.8328% -73 - C4 -1NIS 2.7 ACON_BOVIN
8 PsiBlast_PDB 81.6528% -72 - C4 -8ACN 2.4 ACON_BOVIN
16 PsiBlast_PDB 81.6427% -74 - C4 -1B0J 2.3 ACON_PIG
5 PsiBlast_PDB 81.3228% -73 - C4 -1NIT - ACON_BOVIN -
10 PsiBlast_PDB 81.2028% -76 - C4 -1AMJ - ACON_BOVIN -
6 PsiBlast_PDB 81.1528% -72 - C4 -1ACO - ACON_BOVIN -
11 PsiBlast_PDB 81.0927% -71 - C4 -1C96 2.8 ACON_BOVIN
17 PsiBlast_PDB 81.0327% -76 - C4 -1C97 3.5 ACON_BOVIN