@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0615: (2015-12-02 )
MKKVLVSSLLVLGITITLQTVVEAKGPKVAYTQEGMTALSDTNKDKVTTISIDEIQKSLEGKKPITVSFDIDDTLLFSSQYFQYGKEYVTPGSFDFLHKQKFWDLVAKRGDQDSIPKEYAKKLIAMHQKRGDKIVFITGRTRGSMYKEGEVDKTAKALAKDFKLDKPIAVNYTGDKPKKPYKYDKSYYIKKYGSDIHYGDSDDDIHAAREAGARPIRILRAPNSTNLPLPEAGGYGEEVLENSAY

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_8(3CZ4)
APHA_ECOLI
[Raw transfer]



CMP_D_12(1Z5U)
APHA_SALTM
[Raw transfer]



CMP_A_9(1Z5U)
APHA_SALTM
[Raw transfer]



CMP_C_11(1Z5U)
APHA_SALTM
[Raw transfer]



CMP_B_10(1Z5U)
APHA_SALTM
[Raw transfer]



5HG_A_5(2G1A)
APHA_ECOLI
[Raw transfer]



5HG_B_6(2G1A)
APHA_ECOLI
[Raw transfer]



ADN_B_9(2B8J)
APHA_ECOLI
[Raw transfer]



ADN_A_7(2B82)
APHA_ECOLI
[Raw transfer]



ADN_B_8(2B82)
APHA_ECOLI
[Raw transfer]



ADN_A_7(2B82)
APHA_ECOLI
[Raw transfer]



DCZ_B_6(1RMY)
APHA_ECOLI
[Raw transfer]



DCZ_A_7(1RMY)
APHA_ECOLI
[Raw transfer]



ADN_C_11(1RMT)
APHA_ECOLI
[Raw transfer]



SPM_A_5(2B8J)
APHA_ECOLI
[Raw transfer]



ADN_A_9(1RMT)
APHA_ECOLI
[Raw transfer]



ADN_D_12(1RMT)
APHA_ECOLI
[Raw transfer]



ADN_B_10(1RMT)
APHA_ECOLI
[Raw transfer]



AF3_A_4(2HF7)
APHA_ECOLI
[Raw transfer]



AF3_B_6(2HF7)
APHA_ECOLI
[Raw transfer]
36 PsiBlast_CBE 94.5145% -44 - C5 -1RMT 4.2 APHA_ECOLI
35 PsiBlast_CBE 94.3745% -46 - C5 -1RMT 4.8 APHA_ECOLI
12 PsiBlast_PDB 94.3745% -47 - C5 -2G1A 4.1 APHA_ECOLI
44 Fugue 94.1044% -34 - C5 -1N8N - APHA_ECOLI -
13 PsiBlast_PDB 94.1045% -45 - C5 -3CZ4 Error APHA_ECOLI
33 PsiBlast_CBE 94.0645% -48 - C5 -2G1A 4.5 APHA_ECOLI
4 PsiBlast_PDB 93.7645% -46 - C5 -2B82 4.7 APHA_ECOLI
37 PsiBlast_CBE 93.6745% -48 - C5 -1RMT 3.9 APHA_ECOLI
32 PsiBlast_CBE 93.6045% -46 - C5 -2B82 3.9 APHA_ECOLI
26 PsiBlast_CBE 93.4645% -50 - C5 -1Z5G - APHA_SALTM -
22 PsiBlast_CBE 93.4045% -50 - C5 -1Z5U 4.2 APHA_SALTM
2 PsiBlast_PDB 93.3045% -50 - C5 -1Z5U 3.9 APHA_SALTM
29 PsiBlast_CBE 93.2644% -48 - C5 -1Z88 - APHA_SALTM -
21 PsiBlast_CBE 93.2345% -46 - C5 -1Z5U 4.5 APHA_SALTM
6 PsiBlast_PDB 93.2245% -44 - C5 -2HF7 3.0 APHA_ECOLI
7 PsiBlast_PDB 93.0645% -44 - C5 -1N8N - APHA_ECOLI -
9 PsiBlast_PDB 92.8645% -47 - C5 -1RMQ - APHA_ECOLI -
5 PsiBlast_PDB 92.8545% -43 - C5 -2B8J 3.5 APHA_ECOLI
11 PsiBlast_PDB 92.7945% -46 - C5 -1RMY 3.1 APHA_ECOLI
31 PsiBlast_CBE 92.6745% -45 - C5 -2B8J 4.4 APHA_ECOLI
34 PsiBlast_CBE 92.6345% -44 - C5 -1RMY 3.6 APHA_ECOLI
30 PsiBlast_CBE 92.5745% -45 * C5 *2HF7 3.0 APHA_ECOLI
10 PsiBlast_PDB 92.4345% -45 - C5 -1RMT 4.0 APHA_ECOLI
23 PsiBlast_CBE 92.2245% -50 - C5 -1Z5U 4.3 APHA_SALTM
54 HHSearch 91.1742% -42 - C5 -2B82 4.6 APHA_ECOLI