@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1833: (2015-12-11 )
MIHDMIKTIEHFAETQADFPVYDILGEVHTYGQLKVDSDSLAAHIDSLGLVEKSPVLVFGGQEYEMLATFVALTKSGHAYIPVDQHSALDRIQAIMTVAQPSLIISIGEFPLEVDNVPILDVSQVSAIFEEKTPYEVTHSVKGDDNYYIIFTSGTTGLPKGVQISHDNLLSFTNWMISDDEFSVPERPQMLAQPPYSFDLSVMYWAPTLAMGGTLFALPKTVVNDFKKLFATINELPVQVWTSTPSFADMALLSNDFNSETLPQLTHFYFDGEELTVKTAQKLRQRFPKARIVNAYGPTEATVALSAVAITDEMLETCKRLPIGYTKDDSPTYVIDEEGHKLPNGEQGEIIIAGPAVSKGYLNNPEKTAEAFFQFEGLPAYHTGDLGSMTDEGLLLYGGRMDFQIKFNGYRIELEDVSQNLNKSQYVKSAVAVPRYNKDHKVQNLLAYIVLKEGVRDDFERDLDLTKAIKEDLKDIMMDYMMPSKFIYREDLPLTPNGKIDIKGLMSEVNK

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(3FCE)
DLTA_BACCR
[Raw transfer]



ATP_A_3(3FCC)
DLTA_BACCR
[Raw transfer]



ANP_A_2(4D4G)
?
[Raw transfer]



AMP_A_2(3E7X)
DLTA_BACSU
[Raw transfer]



ANP_A_3(4D4I)
?
[Raw transfer]



AMP_A_9(1AMU)
GRSA_ANEMI
[Raw transfer]



AMP_A_3(3E7W)
DLTA_BACSU
[Raw transfer]



AMP_A_3(3E7W)
DLTA_BACSU
[Raw transfer]



AMP_A_3(3DHV)
DLTA_BACCR
[Raw transfer]



AMP_A_6(4D56)
?
[Raw transfer]



AMP_A_6(4D57)
?
[Raw transfer]



GOL_A_13(3ETC)
?
[Raw transfer]



IXN_B_8(3O83)
?
[Raw transfer]
21 PsiBlast_CBE 99.2073%-109 - C3 -3LGX - DLTA_STRP1 -
22 PsiBlast_CBE 98.7873%-109 - C3 -3LGX - DLTA_STRP1 -
2 PsiBlast_PDB 98.2073%-106 - C3 -3LGX - DLTA_STRP1 -
23 PsiBlast_CBE 97.6773%-106 - C3 -3LGX - DLTA_STRP1 -
8 PsiBlast_PDB 83.5043% -98 - C3 -3E7X 6.5 DLTA_BACSU
7 PsiBlast_PDB 83.1843% -97 - C3 -3E7W 7.0 DLTA_BACSU
31 HHSearch 82.4843% -98 - C3 -3E7W 7.0 DLTA_BACSU
5 PsiBlast_PDB 81.9744%-100 - C3 -3FCC 7.3 DLTA_BACCR
6 PsiBlast_PDB 81.7844%-102 - C3 -3FCE 7.7 DLTA_BACCR
3 PsiBlast_PDB 80.2444%-100 - C3 -3DHV 5.6 DLTA_BACCR
4 PsiBlast_PDB 80.2244%-103 - C3 -4PZP - DLTA_BACCR -
15 PsiBlast_PDB 67.9730% -88 - C3 -1AMU 6.7 GRSA_ANEMI
44 HHSearch 66.9927% -83 - C3 -1AMU - GRSA_ANEMI -
49 Fugue 66.3526% -82 - C3 -1AMU - GRSA_ANEMI -
16 PsiBlast_PDB 65.7029% -73 - C3 -3VNQ - ? -
32 HHSearch 64.7626% -80 - C3 -2VSQ - -
13 PsiBlast_PDB 64.5431% -79 - C3 -4D57 6.8 ?
17 PsiBlast_PDB 63.9629% -70 - C3 -3VNS - ? -
12 PsiBlast_PDB 63.8731% -82 - C3 -4D56 7.2 ?
11 PsiBlast_PDB 63.7931% -81 - C3 -4D4I 6.7 ?
9 PsiBlast_PDB 63.5431% -79 - C3 -4D4G 7.3 ?