@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu06540: (2016-06-10 )
MDDTDLQILSHLQRNGRLTMVELGKLVGLSSPSAAERVRKLEDKGVITGYSANICYEKLNKHVTAFILMEPKSCKHYAAFATSHPDVAENHRITGMYSYVTKVVTESVHTLEDFIDTSMAHGKPTTLVVLSSSSCHPAF

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LYS_D_12(2ZNZ)
REG6_PYRHO
[Raw transfer]




LYS_E_13(2ZNZ)
REG6_PYRHO
[Raw transfer]




LYS_B_10(2ZNZ)
REG6_PYRHO
[Raw transfer]




LYS_F_14(2ZNZ)
REG6_PYRHO
[Raw transfer]




LYS_A_9(2ZNZ)
REG6_PYRHO
[Raw transfer]




ARG_C_10(2ZNY)
REG6_PYRHO
[Raw transfer]




LYS_G_15(2ZNZ)
REG6_PYRHO
[Raw transfer]




LYS_C_11(2ZNZ)
REG6_PYRHO
[Raw transfer]




ARG_D_11(2ZNY)
REG6_PYRHO
[Raw transfer]




ARG_G_13(2ZNY)
REG6_PYRHO
[Raw transfer]




LYS_H_16(2ZNZ)
REG6_PYRHO
[Raw transfer]




ARG_A_9(2ZNY)
REG6_PYRHO
[Raw transfer]




ARG_F_12(2ZNY)
REG6_PYRHO
[Raw transfer]




79 HHSearch 79.6531%-171 * C6 *2CYY - REG6_PYRHO -
77 HHSearch 79.5331%-158 - C6 -2CFX - LRPC_BACSU -
40 PsiBlast_CBE 78.5833%-170 - C6 -2CG4 - ASNC_ECOLI -
1 PsiBlast_PDB 78.5132%-164 - C6 -2CFX - LRPC_BACSU -
8 PsiBlast_PDB 77.7233%-195 - C6 -2P6S - ? -
7 PsiBlast_PDB 77.5433%-194 - C6 -2P5V - ? -
87 HHSearch 77.3931%-170 - C6 -2E1C - REG6_PYRHO -
80 HHSearch 77.2631%-177 - C6 -2P5V - ? -
41 PsiBlast_CBE 77.2633%-162 - C6 -2CG4 - ASNC_ECOLI -
86 HHSearch 76.9729%-180 - C6 -2CG4 - ASNC_ECOLI -
9 PsiBlast_PDB 76.6533%-195 - C6 -2P6T - ? -
76 HHSearch 76.5829%-160 - C6 -2W25 - ? -
39 PsiBlast_CBE 72.4134%-187 - C6 -2VBW - ? -
6 PsiBlast_PDB 71.8633%-173 - C6 -2CYY - REG6_PYRHO -
18 PsiBlast_PDB 71.6434%-197 - C6 -2W24 - ? -
34 PsiBlast_CBE 71.3733%-183 - C6 -2ZNY 2.7 REG6_PYRHO
89 HHSearch 70.9926%-176 - C6 -3I4P - ? -
19 PsiBlast_PDB 70.6534%-189 - C6 -2IVM - ? -
12 PsiBlast_PDB 70.5434%-187 - C6 -2VBW - ? -
35 PsiBlast_CBE 70.4934%-185 - C6 -2VC1 - ? -
31 PsiBlast_CBE 70.3633%-179 - C6 -2ZNY 2.9 REG6_PYRHO
33 PsiBlast_CBE 69.5333%-175 - C6 -2ZNY 2.6 REG6_PYRHO
21 PsiBlast_CBE 69.3333%-166 - C6 -2ZNZ 3.2 REG6_PYRHO
25 PsiBlast_CBE 69.2733%-167 - C6 -2ZNZ 3.4 REG6_PYRHO
32 PsiBlast_CBE 68.8733%-165 - C6 -2ZNY 2.0 REG6_PYRHO
23 PsiBlast_CBE 68.1433%-164 - C6 -2ZNZ 3.2 REG6_PYRHO
22 PsiBlast_CBE 67.9033%-166 - C6 -2ZNZ 3.4 REG6_PYRHO
5 PsiBlast_PDB 67.3933%-160 - C6 -2ZNZ 3.3 REG6_PYRHO
24 PsiBlast_CBE 67.0733%-171 - C6 -2ZNZ 3.1 REG6_PYRHO
29 PsiBlast_CBE 67.0233%-165 - C6 -2ZNY 3.0 REG6_PYRHO
27 PsiBlast_CBE 66.6333%-162 - C6 -2ZNZ 3.3 REG6_PYRHO
26 PsiBlast_CBE 65.3133%-173 - C6 -2ZNZ 3.3 REG6_PYRHO