@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu08930: (2016-06-14 )
MNIVALHVVLYQPEIPANTGNIARTCAATNTTLHLIRPLGFSTDDKMLKRAGLDYWEFVNVVYHDSLEELFEAYKKGKFFFITKFGQQPHTSFDYTDLDEDYFFVFGRETSGLPKDLIQNNMDRCLRLPMTEHVRSLNLSNTAAILVYEALRQQNYRDLK

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_B_4(4PZK)
?
[Raw transfer]




SAH_A_3(4PZK)
?
[Raw transfer]




SAH_A_3(4PZK)
?
[Raw transfer]




SAH_B_7(4JAL)
TRML_ECOLI
[Raw transfer]




SAH_A_3(3N4K)
TRML_YERPE
[Raw transfer]




SAH_G_17(4KGN)
?
[Raw transfer]




SAH_A_9(4KGN)
?
[Raw transfer]




SAH_C_12(4KGN)
?
[Raw transfer]




SAH_A_9(4KGN)
?
[Raw transfer]




SAH_E_14(4KGN)
?
[Raw transfer]




SAH_A_3(4JAL)
TRML_ECOLI
[Raw transfer]




SAH_A_3(1MXI)
TRML_HAEIN
[Raw transfer]




SAH_A_3(1MXI)
TRML_HAEIN
[Raw transfer]




EDO_A_3(3ILK)
Y380_HAEIN
[Raw transfer]




EPE_A_4(4JAL)
TRML_ECOLI
[Raw transfer]




EDO_B_5(4JAL)
TRML_ECOLI
[Raw transfer]




21 PsiBlast_CBE 92.3770%-161 - C3 -4PZK 6.2 ?
1 PsiBlast_PDB 91.6670%-158 - C3 -4PZK 6.1 ?
57 HHSearch 88.9868%-164 - C3 -4PZK 7.1 ?
2 PsiBlast_PDB 78.4854%-159 - C3 -3L8U - ? -
6 PsiBlast_PDB 78.3845%-148 - C3 -4JAL 6.6 TRML_ECOLI
22 PsiBlast_CBE 77.3445%-144 - C3 -4JAL 5.1 TRML_ECOLI
28 PsiBlast_CBE 77.1842%-160 - C3 -4KGN 6.6 ?
5 PsiBlast_PDB 76.6345%-148 - C3 -4JAK - TRML_ECOLI -
26 PsiBlast_CBE 76.0042%-154 - C3 -4KGN 6.6 ?
29 PsiBlast_CBE 75.7542%-157 - C3 -4KGN - ? -
23 PsiBlast_CBE 75.7042%-155 - C3 -4KGN - ? -
25 PsiBlast_CBE 75.4642%-159 - C3 -4KGN - ? -
55 HHSearch 75.2541%-157 - C3 -3N4J - TRML_YERPE -
53 HHSearch 75.1350%-156 - C3 -3L8U - ? -
41 Fugue 74.5945%-134 - C3 -1MXI 5.4 TRML_HAEIN
10 PsiBlast_PDB 74.2742%-150 - C3 -3E5Y - ? -
24 PsiBlast_CBE 73.9442%-159 - C3 -4KGN 6.6 ?
9 PsiBlast_PDB 73.7942%-148 - C3 -3N4K 6.8 TRML_YERPE
51 HHSearch 72.9542%-168 - C3 -4KGN 6.9 ?
8 PsiBlast_PDB 72.8942%-147 - C3 -3N4J - TRML_YERPE -
4 PsiBlast_PDB 72.2745%-129 - C3 -1MXI 5.4 TRML_HAEIN
11 PsiBlast_PDB 71.8242%-162 - C3 -4KGN 6.9 ?