@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu09260: (2016-06-14 )
MEMMGMENIQQNQGLKQKDEQFVWHAMKGAHQADSLIAQKAEGAWVTDTDGRRYLDAMSGLWCVNIGYGRKELAEAAYEQLKELPYYPLTQSHAPAIQLAEKLNEWLGGDYVIFFSNSGSEANETAFKIARQYHLQNGDHSRYKFISRYRAYHGNTLGALSATGQAQRKYKYEPLSQGFLHAAPPDIYRNPDDADTLESANEIDRIMTWELSETIAGVIMEPIITGGGILMPPDGYMKKVEDICRRHGALLICDEVICGFGRTGEPFGFMHYGVKPDIITMAKGITSAYLPLSATAVKRDIFEAYQGEAPYDRFRHVNTFGGSPAACALALKNLQIMEDEQLIQRSRDLGAKLLGELQALREHPAVGDVRGKGLLIGIELVKDKLTKEPADAAKVNQVVAACKEKGLIIGKNGDTVAGYNNVIQLAPPFCLTEEDLSFIVKTVKESFQTI

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

P00_A_11(4JEX)
ARGD_SALTY
[Raw transfer]



P00_B_26(4JEX)
ARGD_SALTY
[Raw transfer]



P00_B_19(4JEW)
ARGD_SALTY
[Raw transfer]



P00_A_3(4JEW)
ARGD_SALTY
[Raw transfer]



PLP_B_4(3DXV)
ACLR_ACHOB
[Raw transfer]



PLP_A_3(2PB2)
ARGD_SALTY
[Raw transfer]



PLP_B_6(2ZUK)
ACLR_ACHOB
[Raw transfer]



PLP_B_5(3DXW)
ACLR_ACHOB
[Raw transfer]



PLP_A_3(4JF1)
ARGD_SALTY
[Raw transfer]



PLP_A_3(3I5T)
?
[Raw transfer]



PLP_B_6(1MGV)
BIOA_ECOLI
[Raw transfer]



PLP_A_3(2PB0)
ARGD_SALTY
[Raw transfer]



PLP_B_4(2PB0)
ARGD_SALTY
[Raw transfer]



PLP_B_8(1DTY)
BIOA_ECOLI
[Raw transfer]



PLP_A_7(1DTY)
BIOA_ECOLI
[Raw transfer]



PLP_A_7(1DTY)
BIOA_ECOLI
[Raw transfer]



TA8_A_3(4A6R)
?
[Raw transfer]



EDO_B_7(2PB0)
ARGD_SALTY
[Raw transfer]
116 HHSearch 74.1167% -89 - C1 -3N5M - ? -
1 PsiBlast_PDB 73.4363% -89 * C1 *3N5M - ? -
17 PsiBlast_PDB 56.2832%-110 - C1 -3I5T - ? -
15 PsiBlast_PDB 55.3033%-111 - C1 -3DOD - BIOK_BACSU -
13 PsiBlast_PDB 55.1830%-101 - C1 -4E3R - ? -
6 PsiBlast_PDB 54.3231% -99 - C1 -3NUI - ? -
16 PsiBlast_PDB 53.8533%-107 - C1 -3DRD - BIOK_BACSU -
5 PsiBlast_PDB 53.8031%-103 - C1 -4GRX - ? -
21 PsiBlast_CBE 53.3236%-102 - C1 -3HMU - ? -
33 PsiBlast_CBE 53.2633%-110 - C1 -3DOD - BIOK_BACSU -
124 Fugue 51.9830%-111 - C1 -1DTY 3.3 BIOA_ECOLI
3 PsiBlast_PDB 51.8534% -85 - C1 -3FCR - ? -
101 HHSearch 51.8332% -99 - C1 -4E3Q - ? -
4 PsiBlast_PDB 49.9433% -87 - C1 -3GJU - ? -
108 HHSearch 49.7429%-119 - C1 -4WYD - BIOA_MYCTU -
103 HHSearch 49.6233% -88 - C1 -3GJU - ? -
23 PsiBlast_CBE 49.5634%-105 - C1 -4BA4 - ? -
2 PsiBlast_PDB 49.5236%-101 - C1 -3HMU - ? -
111 HHSearch 49.2431%-105 - C1 -4JF1 3.3 ARGD_SALTY
26 PsiBlast_CBE 49.2334%-104 - C1 -4AH3 - ? -
106 HHSearch 48.4730%-102 - C1 -3I5T 3.9 ?
99 PsiBlast_CBE 47.6331%-101 - C1 -2ZUK 2.6 ACLR_ACHOB
98 PsiBlast_CBE 47.4131%-100 - C1 -3DXW 2.5 ACLR_ACHOB
100 PsiBlast_CBE 46.9831%-109 - C1 -1MGV 2.9 BIOA_ECOLI
112 HHSearch 46.1931%-102 - C1 -4A6R 1.7 ?
87 PsiBlast_CBE 43.5131% -95 - C1 -4JEW 3.2 ARGD_SALTY
89 PsiBlast_CBE 43.2031% -98 - C1 -4JEX 3.1 ARGD_SALTY
92 PsiBlast_CBE 42.8331% -99 - C1 -2PB2 3.3 ARGD_SALTY
95 PsiBlast_CBE 42.3031% -90 - C1 -3DXV 2.3 ACLR_ACHOB
88 PsiBlast_CBE 42.2631%-100 - C1 -4JEW 3.6 ARGD_SALTY
97 PsiBlast_CBE 42.2231%-107 - C1 -1DTY 3.3 BIOA_ECOLI
93 PsiBlast_CBE 41.6131% -97 - C1 -2PB0 3.6 ARGD_SALTY
94 PsiBlast_CBE 40.3931% -98 - C1 -2PB0 3.6 ARGD_SALTY
90 PsiBlast_CBE 40.3031% -99 - C1 -4JEX 3.3 ARGD_SALTY
96 PsiBlast_CBE 39.6431%-107 - C1 -1DTY 3.1 BIOA_ECOLI