@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu10400: (2016-06-16 )
MANQKKKTLPPQHQNQQPGFEYLMDPRPVFDKPKKAKKLEGKTAIITGGDSGIGRAVSVLFAKEGANVVIVYLNEHQDAEETKQYVEKEGVKCLLIAGDVGDEAFCNDVVGQASQVFPSIDILVNNAAEQHVQPSIEKITSHQLIRTFQTNIFSMFYLTKAVLPHLKKGSSIINTASITAYKGNKTLIDYSATKGAIVTFTRSLSQSLVQQGIRVNAVAPGPIWTPLIPASFAAKDVEVFGSDVPMERPGQPVEVAPSYLYLASDDSTYVTGQTIHVNGGTIVNG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_C_12(3R3S)
?
[Raw transfer]




NAD_B_8(3R3S)
?
[Raw transfer]




NAD_A_5(3R3S)
?
[Raw transfer]




NAD_D_15(3R3S)
?
[Raw transfer]




FMT_D_16(3R3S)
?
[Raw transfer]




FMT_C_13(3R3S)
?
[Raw transfer]




2 PsiBlast_PDB 77.5966% -64 - C3 -3IJR - ? -
24 PsiBlast_CBE 77.1767% -63 - C3 -3I3O - ? -
27 PsiBlast_CBE 76.9667% -63 - C3 -3I3O - ? -
25 PsiBlast_CBE 76.8067% -62 - C3 -3I3O - ? -
1 PsiBlast_PDB 76.4467% -63 - C3 -3I3O - ? -
26 PsiBlast_CBE 76.1367% -63 - C3 -3I3O - ? -
23 PsiBlast_CBE 76.0567% -69 - C3 -3I3O - ? -
21 PsiBlast_CBE 75.5867% -65 - C3 -3I3O - ? -
102 PsiBlast_CBE 68.4635%-110 - C3 -2EWM - PED_AROAE -
105 PsiBlast_CBE 67.5535%-111 - C3 -2EW8 - PED_AROAE -
104 PsiBlast_CBE 67.2835%-112 - C3 -2EW8 - PED_AROAE -
103 PsiBlast_CBE 65.8235%-108 - C3 -2EWM - PED_AROAE -
3 PsiBlast_PDB 65.7343% -68 - C3 -3R3S 11.6 ?
34 PsiBlast_CBE 65.4836%-100 - C3 -4MOW - ? -
76 PsiBlast_CBE 65.2434%-125 - C3 -4WJZ - FABG_VIBCH -
29 PsiBlast_CBE 65.1943% -69 - C3 -3R3S 11.9 ?
30 PsiBlast_CBE 65.1143% -69 - C3 -3R3S 11.5 ?
5 PsiBlast_PDB 65.0236%-102 - C3 -4MOW - ? -
28 PsiBlast_CBE 64.8443% -67 - C3 -3R3S 11.2 ?
107 HHSearch 64.4731%-103 - C3 -4RGB - ? -