@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu13160: (2016-06-20 )
MALFTAKVTARGGRAGHITSDDGVLDFDIVMPNAKKEGQTGTNPEQLFAAGYAACFGGALEHVAKEQNIEIDSEIEGQVSLMKDESDGGFKIGVTLVVNTKDLDREKAQELVNAAHEFCPYSKATRGNVDVKLELK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MES_B_5(3I07)
?
[Raw transfer]



DTT_D_4(1N2F)
?
[Raw transfer]



MCO_B_3(3LUS)
?
[Raw transfer]



EDO_A_5(4NOZ)
?
[Raw transfer]



GOL_A_3(1USP)
?
[Raw transfer]



GOL_A_3(1USP)
?
[Raw transfer]



DTT_C_3(1N2F)
?
[Raw transfer]



EDO_A_7(4NOZ)
?
[Raw transfer]



DTT_C_3(1N2F)
?
[Raw transfer]



GOL_B_4(3I07)
?
[Raw transfer]



EDO_A_7(4NOZ)
?
[Raw transfer]
1 PsiBlast_PDB 91.5797%-150 - C2 -2BJO - OHRB_BACSU -
34 HHSearch 83.9090%-139 - C2 -2BJO - OHRB_BACSU -
22 PsiBlast_CBE 74.4446%-151 - C2 -4NOZ 2.4 ?
8 PsiBlast_PDB 74.3346%-150 - C2 -4NOZ 1.8 ?
2 PsiBlast_PDB 72.3548%-114 - C2 -1USP 2.9 ?
37 HHSearch 71.9247%-168 - C- -4XX2 - ? -
3 PsiBlast_PDB 71.7845%-171 - C- -4XX2 - ? -
35 HHSearch 71.7448%-124 - C2 -1USP 2.9 ?
5 PsiBlast_PDB 71.2637%-158 - C2 -3I07 2.8 ?
6 PsiBlast_PDB 70.4037%-164 - C2 -3LUS 2.6 ?
23 PsiBlast_CBE 69.6148%-112 - C2 -1N2F 2.8 ?
7 PsiBlast_PDB 69.3740%-135 - C- -4MH4 - ? -
39 HHSearch 69.2939%-173 - C2 -3EER - ? -
40 HHSearch 69.1743%-144 * C2 *4NOZ 2.8 ?
42 HHSearch 68.3646%-128 - C2 -1N2F 2.8 ?
4 PsiBlast_PDB 68.1637%-158 - C2 -3EER - ? -
21 PsiBlast_CBE 67.9937%-155 - C2 -3I07 3.1 ?
9 PsiBlast_PDB 67.8348%-116 - C2 -1N2F 2.7 ?
41 HHSearch 66.9843%-140 - C- -4MH4 - ? -
27 Fugue 64.6745%-117 - C2 -1N2F - ? -