@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu14000: (2016-06-21 )
MEHLLNPKAREIEISGIRKFSNLVAQHEDVISLTIGQPDFFTPHHVKAAAKKAIDENVTSYTPNAGYLELRQAVQLYMKKKADFNYDAESEIIITTGASQAIDAAFRTILSPGDEVIMPGPIYPGYEPIINLCGAKPVIVDTTSHGFKLTARLIEDALTPNTKCVVLPYPSNPTGVTLSEEELKSIAALLKGRNVFVLSDEIYSELTYDRPHYSIATYLRDQTIVINGLSKSHSMTGWRIGFLFAPKDIAKHILKVHQYNVSCASSISQKAALEAVTNGFDDALIMREQYKKRLDYVYDRLVSMGLDVVKPSGAFYIFPSIKSFGMTSFDFSMALLEDAGVALVPGSSFSTYGEGYVRLSFACSMDTLREGLDRLELFVLKKREAMQTINNGV

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLP_F_6(1GDE)
?
[Raw transfer]



PLP_B_13(1O4S)
AAT_THEMA
[Raw transfer]



EPE_G_7(2DOU)
?
[Raw transfer]



PLP_B_4(1GD9)
?
[Raw transfer]



PLP_A_12(1O4S)
AAT_THEMA
[Raw transfer]



ASP_D_4(1GCK)
AAT_THET8
[Raw transfer]



PLP_A_12(1O4S)
AAT_THEMA
[Raw transfer]



GLU_D_4(1GDE)
?
[Raw transfer]



PLP_A_3(1GD9)
?
[Raw transfer]



PLP_F_6(1GCK)
AAT_THET8
[Raw transfer]



PLP_B_4(1J32)
?
[Raw transfer]



PLP_A_5(1B5P)
AAT_THET8
[Raw transfer]



PLP_B_6(1B5P)
AAT_THET8
[Raw transfer]



PLP_B_6(1B5O)
AAT_THET8
[Raw transfer]



GOL_A_6(2O0R)
DAPC_MYCTU
[Raw transfer]



AKG_A_4(3AOW)
?
[Raw transfer]



EDO_A_11(1VP4)
?
[Raw transfer]
65 HHSearch 86.5447%-114 - C1 -4MY5 - ? -
22 PsiBlast_CBE 84.7041%-118 - C1 -1GD9 4.0 ?
21 PsiBlast_CBE 83.8041%-117 - C1 -1GDE 5.4 ?
1 PsiBlast_PDB 82.7941%-117 - C1 -1GDE - ? -
2 PsiBlast_PDB 82.5641%-116 - C1 -1GD9 - ? -
58 HHSearch 80.6841%-114 - C1 -1GD9 3.7 ?
23 PsiBlast_CBE 79.1236%-119 - C1 -1J32 4.5 ?
37 PsiBlast_CBE 78.0538%-120 - C1 -1O4S 3.9 AAT_THEMA
3 PsiBlast_PDB 77.6336%-115 - C1 -1J32 - ? -
56 HHSearch 77.3436%-109 - C1 -1J32 - ? -
18 PsiBlast_PDB 75.9130%-128 - C1 -2O0R 2.9 DAPC_MYCTU
9 PsiBlast_PDB 74.7438%-118 - C1 -1O4S 3.9 AAT_THEMA
14 PsiBlast_PDB 74.3531%-129 - C1 -1V2D - ? -
44 PsiBlast_CBE 74.2331%-125 - C1 -1V2F - ? -
16 PsiBlast_PDB 74.1431%-128 - C1 -1V2F - ? -
62 HHSearch 73.7938%-118 - C1 -1O4S 3.9 AAT_THEMA
66 HHSearch 73.7227%-126 - C1 -4WLH - KAT1_HUMAN -
17 PsiBlast_PDB 73.1126%-134 - C1 -1U08 - YBDL_ECOLI -
64 HHSearch 72.5827%-123 - C1 -4WP0 - KAT1_HUMAN -
63 HHSearch 72.4226%-128 - C1 -1U08 - YBDL_ECOLI -
67 HHSearch 71.6936%-109 - C1 -1B5P 4.2 AAT_THET8
25 PsiBlast_CBE 70.6936%-114 - C1 -1B5P 4.0 AAT_THET8
26 PsiBlast_CBE 70.5136%-114 - C1 -1B5O 4.4 AAT_THET8
24 PsiBlast_CBE 64.5636%-110 - C1 -1GCK 6.0 AAT_THET8