@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu15100: (2016-06-23 )
MTKVERLLINYKTLEEFKKFKEYGIQELSMLEELQDNIIENDSTSPFYGIYFGDKLVARMSLYQVNGKSNPYFDNRQDYLELWKLEVLPGYQNRGYGRALVEFAKSFKMPIRTNPRMKSAEFWNKMNFKTVKYDMARDKGENPLIWHPDMDREMTPGESA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_A_9(2PR1)
YLBP_BACSU
[Raw transfer]
21 PsiBlast_CBE 84.1999% -92 - C2 -2PR1 - YLBP_BACSU -
46 Fugue 82.3099% -75 - C2 -2PR1 7.8 YLBP_BACSU
26 HHSearch 82.3099% -75 - C2 -2PR1 - YLBP_BACSU -
1 PsiBlast_PDB 82.3099% -75 - C2 -2PR1 - YLBP_BACSU -
28 HHSearch 51.1616%-169 * C2 *2OB0 - NAA50_HUMAN -
27 HHSearch 49.5721%-181 - C2 -2DXQ - ? -
39 HHSearch 49.5122%-122 - C2 -2JDC - ? -
44 HHSearch 47.4919%-195 - C2 -2CNT - ? -
32 HHSearch 47.2425%-173 - C2 -2ATR - ? -
52 Fugue 45.7515% -92 - C2 -1YVK - YVBK_BACSU -
29 HHSearch 45.6416%-183 - C2 -3BLN - ? -
45 HHSearch 45.119%-184 - C2 -2PC1 - ? -
41 HHSearch 45.0314%-166 - C2 -1CJW - SNAT_SHEEP -
36 HHSearch 44.0312%-198 - C2 -2FE7 - ? -
33 HHSearch 43.8020%-205 - C2 -3FNC - ? -
43 HHSearch 43.5318%-167 - C2 -4CRY - PANM_ECOLI -
53 Fugue 43.2816%-100 - C2 -1B87 - ? -
40 HHSearch 43.1615%-192 - C2 -3FYN - ? -
34 HHSearch 43.0414%-189 - C2 -3DSB - ? -
30 HHSearch 42.6412%-143 - C2 -4M85 - ? -