@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu15750: (2016-06-24 )
MAELNKTKVRKELRTERPSIYSFELDEIKQWLTDNGEKPFRAAQIFEWLYEKRVSSFEDMTNLSKDLREKLNTRFVLTTLKTAVKQTSQDGTMKFLFELHDGYTIETVLMRHEYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVAQVVKVQKALDETDERVSSVVIMGIGEPFDNFNEMLAFLKIINHDKGLNIGARHITVSTSGIIPKIYEFADQQMQINFAISLHAPNTEIRSRLMPINRAYKLPDLMEAVKYYINKTGRRISFEYGLFGGVNDQVEHAEELADLLEGVKCHVNLIPVNYVPERDYVRTPRDQIFAFEKTLKSRGVNVTIRREQGHDIDAACGQLRAKERQDETR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAM_A_4(3RFA)
RLMN_ECOLI
[Raw transfer]




SAM_A_4(3RFA)
RLMN_ECOLI
[Raw transfer]




SAM_A_4(3RFA)
RLMN_ECOLI
[Raw transfer]




SAM_B_3(4PL1)
?
[Raw transfer]




SAM_A_5(4PL1)
?
[Raw transfer]




SF4_B_4(4PL1)
?
[Raw transfer]




SF4_A_3(3RFA)
RLMN_ECOLI
[Raw transfer]




1 PsiBlast_PDB 91.6538%-126 - C4 -3RFA 6.2 RLMN_ECOLI
19 HHSearch 90.7236%-125 - C4 -3RFA 6.2 RLMN_ECOLI
2 PsiBlast_PDB 90.6837%-112 - C4 -4PL1 6.5 ?
41 Fugue 90.5235%-127 - C4 -3RFA 6.2 RLMN_ECOLI
17 PsiBlast_CBE 90.5137%-124 - C4 -4PL1 6.5 ?
21 HHSearch 64.1817%-148 - C4 -3C8F - PFLA_ECOLI -
20 HHSearch 56.6316%-113 - C4 -2A5H - KAMA_CLOSU -
28 HHSearch 56.2018%-158 - C- -3CAN - ? -
23 HHSearch 55.0316%-154 - C4 -1TV8 - MOAA_STAA8 -
42 Fugue 54.1016%-116 - C4 -3C8F - PFLA_ECOLI -
22 HHSearch 53.6516%-111 * C4 *2YX0 - TYW1_PYRHO -
43 Fugue 53.1521% -84 - C4 -4N5H - ? -
24 HHSearch 53.1413%-134 - C4 -4U0O - LIPA2_THEEB -
25 HHSearch 52.1618%-131 - C4 -2Z2U - TYW1_METJA -
32 HHSearch 51.7515%-125 - C4 -3T7V - PYLB_METBF -
44 Fugue 49.6815% -97 - C4 -2YX0 - TYW1_PYRHO -
34 HHSearch 47.8716%-111 - C4 -4R33 - ? -
35 HHSearch 45.9814%-109 - C4 -4K36 - ANSME_CLOP1 -
36 HHSearch 45.7112%-132 - C4 -1OLT - HEMN_ECOLI -
33 HHSearch 45.6511%-108 - C4 -1R30 - BIOB_ECOLI -