@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu16670: (2016-06-26 )
MKTIHITHPHHLIKEEQAKSVMALGYFDGVHLGHQKVIGTAKQIAEEKGLTLAVMTFHPHPSHVLGRDKEPKDLITPLEDKINQIEQLGTEVLYVVKFNEVFASLSPKQFIDQYIIGLNVQHAVAGFDFTYGKYGKGTMKTMPDDLDGKAGCTMVEKLTEQDKKISSSYIRTALQNGDVELANVLLGQPYFIKGIVIHGDKRGRTIGFPTANVGLNNSYIVPPTGVYAVKAEVNGEVYNGVCNIGYKPTFYEKRPEQPSIEVNLFDFNQEVYGAAIKIEWYKRIRSERKFNGIKELTEQIEKDKQEAIRYFSNLRK

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PPV_B_6(2X0K)
RIBF_CORAM
[Raw transfer]




PPV_A_4(4UZE)
RIBF_CORAM
[Raw transfer]




PPV_A_3(4UZF)
RIBF_CORAM
[Raw transfer]




PPV_A_4(2X0K)
RIBF_CORAM
[Raw transfer]




PPV_B_6(4UZE)
RIBF_CORAM
[Raw transfer]




PPV_B_5(4UZF)
RIBF_CORAM
[Raw transfer]




PPV_A_4(2X0K)
RIBF_CORAM
[Raw transfer]




AMP_G_7(1T6Y)
?
[Raw transfer]




GOL_A_5(3OP1)
?
[Raw transfer]




GOL_A_5(3OP1)
?
[Raw transfer]




CIT_D_4(1MRZ)
?
[Raw transfer]




CIT_C_3(1MRZ)
?
[Raw transfer]




CIT_C_3(1MRZ)
?
[Raw transfer]




CIT_C_3(1MRZ)
?
[Raw transfer]




44 HHSearch 88.4730%-111 * C4 *2X0K 2.9 RIBF_CORAM
1 PsiBlast_PDB 87.7337%-121 - C4 -3OP1 2.4 ?
45 HHSearch 85.9835%-111 - C4 -3OP1 2.4 ?
21 PsiBlast_CBE 84.0631%-110 - C4 -2X0K 2.8 RIBF_CORAM
2 PsiBlast_PDB 83.8431%-113 - C4 -2X0K 2.9 RIBF_CORAM
3 PsiBlast_PDB 83.1031%-112 - C4 -4UZF 4.5 RIBF_CORAM
46 HHSearch 82.5833%-141 - C4 -1MRZ 4.1 ?
10 PsiBlast_PDB 82.0034%-137 - C4 -1S4M - ? -
34 Fugue 81.9932%-146 - C4 -1MRZ 3.8 ?
5 PsiBlast_PDB 81.8430%-113 - C4 -3ZUG - RIBF_CORAM -
4 PsiBlast_PDB 81.7231%-109 - C4 -4UZE 4.4 RIBF_CORAM
6 PsiBlast_PDB 81.4234%-136 - C4 -1MRZ 3.8 ?
7 PsiBlast_PDB 80.7434%-131 - C4 -1T6X - ? -
23 PsiBlast_CBE 80.7331%-110 - C4 -4UZE 3.1 RIBF_CORAM
28 PsiBlast_CBE 80.3534%-140 - C4 -1MRZ 3.8 ?
22 PsiBlast_CBE 80.1931%-112 - C4 -4UZF 3.2 RIBF_CORAM
11 PsiBlast_PDB 80.1034%-135 - C4 -2I1L - ? -
26 PsiBlast_CBE 80.0534%-135 - C4 -1T6X - ? -
24 PsiBlast_CBE 79.9534%-131 - C4 -1T6Z - ? -
27 PsiBlast_CBE 79.6834%-136 - C4 -1S4M - ? -
25 PsiBlast_CBE 76.7334%-136 - C4 -1T6Y 5.9 ?