@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu17100: (2016-06-27 )
MITYVFPGQGSQKQGMGSGLFDEFKELTDQADEILGYSIKRLCLENPYSNLNKTQFTQPALYVVNALSYLKKIRDEEVKPDFVAGHSLGEYNALFAAEAFDFETGLQLVRKRGELMSLISNGGMAAVMGLNEEQVAKALKEYHLHDVDIANVNAPYQIVISGKKDEIEKAASLFETMTEVTMVLPLNVSGAFHSRYMNKAKEEFEEFLHAFYFSPPSIPVISNVYAKPYTYEFMKQTLADQINHSVKWTDSISYLMKKGHMEFEEVGPGNVLTGLIHRIKKDAEAMPR

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COZ_B_2(2G2Z)
FABD_ECOLI
[Raw transfer]




GLY_A_2(3TQE)
?
[Raw transfer]




GOL_B_2(2G1H)
FABD_ECOLI
[Raw transfer]




GOL_A_2(3K89)
?
[Raw transfer]




GLY_A_2(3TQE)
?
[Raw transfer]




AE4_A_9(2C2N)
FABD_HUMAN
[Raw transfer]




NHE_A_2(3R97)
?
[Raw transfer]




ACY_A_4(1NM2)
?
[Raw transfer]




ACY_A_3(1NM2)
?
[Raw transfer]




CXS_A_14(3HJV)
?
[Raw transfer]




1 PsiBlast_PDB 94.1855%-109 - C- -3RGI - ? -
2 PsiBlast_PDB 93.4756%-109 - C2 -3SBM - ? -
57 HHSearch 92.9556%-109 - C2 -3SBM - ? -
51 HHSearch 91.0152%-106 - C2 -3G87 - ? -
3 PsiBlast_PDB 90.0151%-108 - C2 -3G87 - ? -
64 HHSearch 81.4637%-106 * C2 *1MLA - FABD_ECOLI -
14 PsiBlast_PDB 79.6735%-101 - C2 -3R97 2.6 ?
13 PsiBlast_PDB 79.3435% -97 - C2 -3K89 2.9 ?
66 HHSearch 78.7034%-103 - C2 -3TQE 3.2 ?
20 PsiBlast_PDB 78.0132% -95 - C2 -3TQE 3.5 ?
17 PsiBlast_PDB 77.6335%-109 - C2 -3HJV 3.1 ?
4 PsiBlast_PDB 77.3943% -91 - C2 -4RR5 - FABD_SYNY3 -
7 PsiBlast_PDB 76.7335%-110 - C2 -3IM8 - ? -
54 HHSearch 76.4635% -98 - C2 -3PTW - ? -
11 PsiBlast_PDB 76.1736%-101 - C2 -2G2Y - FABD_ECOLI -
6 PsiBlast_PDB 76.1736%-113 - C- -3EZO - ? -
9 PsiBlast_PDB 76.1536%-101 - C2 -2G1H 2.2 FABD_ECOLI
16 PsiBlast_PDB 75.9834%-101 - C2 -3PTW - ? -
5 PsiBlast_PDB 75.9538% -93 - C2 -3IM9 - FABD_STAAM -
10 PsiBlast_PDB 75.8036%-102 - C2 -2G2O - FABD_ECOLI -
12 PsiBlast_PDB 74.5236%-102 - C2 -2G2Z 5.0 FABD_ECOLI
23 PsiBlast_CBE 69.8732%-102 - C2 -2C2N 2.1 FABD_HUMAN