@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu28050: (2016-07-14 )
MTKPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQAENHSETFYDKTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDGDYYSVMGLPISKTMRALRHFDIRA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DUT_B_5(1EXC)
MAF_BACSU
[Raw transfer]



DUT_A_4(1EXC)
MAF_BACSU
[Raw transfer]



GOL_A_3(4JHC)
YCEF_ECOLI
[Raw transfer]



GOL_A_3(4JHC)
YCEF_ECOLI
[Raw transfer]



GOL_B_9(4JHC)
YCEF_ECOLI
[Raw transfer]



EDO_A_8(4OO0)
?
[Raw transfer]



EDO_B_13(4OO0)
?
[Raw transfer]
42 Fugue 94.48100%-101 - C4 -1EX2 - MAF_BACSU -
1 PsiBlast_PDB 94.48100%-101 - C4 -1EX2 - MAF_BACSU -
18 PsiBlast_CBE 94.06100%-105 - C4 -1EX2 - MAF_BACSU -
2 PsiBlast_PDB 94.04100% -99 - C4 -1EXC 4.0 MAF_BACSU
17 PsiBlast_CBE 93.79100%-101 - C4 -1EXC 4.7 MAF_BACSU
19 PsiBlast_CBE 89.09100%-111 - C4 -4HEB - MAF_BACSU -
25 HHSearch 80.1599% -29 - C4 -1EX2 - MAF_BACSU -
3 PsiBlast_PDB 71.2546% -59 - C4 -4P0U - ? -
26 HHSearch 70.9245% -58 - C4 -4P0E - YHDE_ECOLI -
4 PsiBlast_PDB 70.6046% -63 - C4 -4P0E - YHDE_ECOLI -
20 PsiBlast_CBE 70.1346% -57 - C4 -4P0E - YHDE_ECOLI -
7 PsiBlast_PDB 65.3435% -46 - C4 -4JHC 3.5 YCEF_ECOLI
8 PsiBlast_PDB 65.3034% -51 - C4 -4LU1 - ? -
29 HHSearch 63.3040% 1 - C4 -4OO0 2.2 ?
28 HHSearch 62.1442% 21 * C4 *2P5X - ASML_HUMAN -
5 PsiBlast_PDB 61.5041% 32 - C4 -2P5X - ASML_HUMAN -
23 PsiBlast_CBE 60.1035% -67 - C4 -4JHC 1.9 YCEF_ECOLI
24 PsiBlast_CBE 59.1334% -71 - C4 -4LU1 - ? -
27 HHSearch 58.3832% -23 - C4 -4JHC 3.5 YCEF_ECOLI
22 PsiBlast_CBE 56.5038% -12 - C4 -4OO0 2.6 ?