@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu28210: (2016-07-14 )
MKIYGVYMDRPLSAGEEDRMMAAVSAEKREKCRRFYHKEDAHRTLIGDMLIRTAAAKAYGLDPAGISFGVQEYGKPYIPALPDMHFNISHSGRWIVCAVDSKPIGIDIEKMKPGTIDIAKRFFSPTEYSDLQAKHPDQQTDYFYHLWSMKESFIKQAGKGLSLPLDSFSVRLKDDGHVSIELPDGHEPCFIRTYDADEEYKLAVCAAHPDFCDGIEMKTYEELL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_A_3(1QR0)
SFP_BACSU
[Raw transfer]




COA_A_3(1QR0)
SFP_BACSU
[Raw transfer]




COA_A_3(1QR0)
SFP_BACSU
[Raw transfer]




COA_A_4(4MRT)
SFP_BACSU
[Raw transfer]




COA_A_2(2C43)
ADPPT_HUMAN
[Raw transfer]




COA_A_3(2CG5)
ADPPT_HUMAN
[Raw transfer]




COA_A_3(1QR0)
SFP_BACSU
[Raw transfer]




A3P_D_4(1FTH)
ACPS_STRPN
[Raw transfer]




1 PsiBlast_PDB 99.8171%-123 - C4 -4MRT 8.6 SFP_BACSU
41 Fugue 97.8971%-122 - C4 -1QR0 7.3 SFP_BACSU
2 PsiBlast_PDB 97.1271%-122 - C4 -1QR0 7.3 SFP_BACSU
16 HHSearch 94.9372%-118 - C4 -1QR0 7.3 SFP_BACSU
42 Fugue 59.1525% 37 - C4 -2BYD - ADPPT_HUMAN -
5 PsiBlast_PDB 52.1930% -10 - C4 -2CG5 6.7 ADPPT_HUMAN
3 PsiBlast_PDB 51.9930% -5 - C4 -2BYD - ADPPT_HUMAN -
18 HHSearch 51.3015% -37 - C4 -4U89 - ? -
4 PsiBlast_PDB 49.8530% 10 - C4 -2C43 8.1 ADPPT_HUMAN
19 HHSearch 48.0016% -40 - C4 -4QVH - MALE_ECOLI -
43 Fugue 46.3579% 67 - C4 -1QR0 4.5 SFP_BACSU
44 Fugue 45.4816% -54 * C4 *1F7L - ACPS_BACSU -
45 Fugue 45.4015% 1 - C4 -4QJK - ? -
10 PsiBlast_PDB 43.3723%-113 - C4 -4UOJ - ? -
9 PsiBlast_PDB 43.0623%-116 - C4 -4CVU - ? -
36 HHSearch 41.9825% -93 - C- -4JM7 - ACPS_STAAC -
33 HHSearch 41.8624% -41 - C4 -5CXD - ACPS_STAAC -
13 PsiBlast_PDB 41.7719% -92 - C4 -3HYK - ACPS_BACAN -
49 Fugue 39.7420% -8 - C1 -4KXR - ESPG5_MYCTU -
38 HHSearch 39.0815% -34 - C4 -3GWM - ACPS_MYCS2 -