@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu39840: (2016-08-06 )
MGRLENKTAVITGAATGIGQATAEVFANEGARVIIGDINKDQMEETVDAIRKNGGQAESFHLDVSDENSVKAFADQIKDACGTIDILFNNAGVDQEGGKVHEYPVDLFDRIIAVDLRGTFLCSKYLIPLMLENGGSIINTSSMSGRAADLDRSGYNAAKGGITNLTKAMAIDYARNGIRVNSISPGTIETPLIDKLAGTKEQEMGEQFREANKWITPLGRLGQPKEMATVALFLASDDSSYVTGEDITADGGIMAYTWPGKMLIEEKWKEETK

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_B_8(4FN4)
?
[Raw transfer]




NAI_B_6(4NBU)
?
[Raw transfer]




NAI_A_5(4NBU)
?
[Raw transfer]




NAI_C_8(4NBU)
?
[Raw transfer]




NAI_D_9(4NBU)
?
[Raw transfer]




THJ_A_4(3GED)
?
[Raw transfer]




9 PsiBlast_PDB 87.5637% -69 - C2 -3R1I - ? -
105 HHSearch 86.0938% -44 - C2 -4G81 - ? -
113 HHSearch 85.6637% -33 - C2 -4URF - ? -
23 PsiBlast_CBE 85.5241% -48 - C2 -4NBU 10.1 ?
1 PsiBlast_PDB 85.1941% -50 - C2 -4NBU 9.6 ?
22 PsiBlast_CBE 83.9741% -48 - C2 -4NBU 10.1 ?
117 HHSearch 83.5632% -60 - C2 -4J2H - ? -
3 PsiBlast_PDB 83.4339% -81 - C2 -4I5G - ? -
2 PsiBlast_PDB 83.4340% -50 - C2 -4DQX - ? -
14 PsiBlast_PDB 82.8937% -61 - C2 -3O03 - ? -
21 PsiBlast_CBE 82.8241% -48 - C2 -4NBU 11.6 ?
111 HHSearch 82.7536% -52 - C2 -3TZQ - ? -
10 PsiBlast_PDB 82.4737% -55 - C2 -3VTZ - ? -
43 PsiBlast_CBE 82.3637% -83 - C2 -4I5E - ? -
42 PsiBlast_CBE 82.1537% -82 - C2 -4I5E - ? -
25 PsiBlast_CBE 82.1140% -50 - C2 -4NBT - ? -
45 PsiBlast_CBE 81.8437% -84 - C2 -4I5E - ? -
13 PsiBlast_PDB 81.6337% -58 - C2 -3CXR - ? -
24 PsiBlast_CBE 81.4740% -49 - C2 -4NBT - ? -
122 HHSearch 81.4036% -8 - C2 -1GEE - DHG_BACME -
108 HHSearch 77.9430% -96 - C2 -3GED 3.1 ?
109 HHSearch 75.8633% -41 - C2 -4FN4 Error ?